Zfp398 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000006703 T108912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF398
M07716_2.00
Homo sapiens
CTSYYTCYYTCCCH

DGGGARRGARRSAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData
0.804 0.962
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000008743 C2H2 ZF 344 365
ENSRNOP00000008743 C2H2 ZF 400 421
ENSRNOP00000008743 C2H2 ZF 428 450
ENSRNOP00000008743 C2H2 ZF 456 478
ENSRNOP00000008743 C2H2 ZF 484 506
ENSRNOP00000008743 C2H2 ZF 512 534
ENSRNOP00000008743 C2H2 ZF 540 562
ENSRNOP00000008743 C2H2 ZF 568 591

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Zfp398 Mus musculus ENSMUSG00000062519 I 0.825
ENSTSYG00000002784 Tarsius syrichta ENSTSYG00000002784 I 0.810
ENSSTOG00000013384 Ictidomys tridecemlineatus ENSSTOG00000013384 I 0.807
ZNF398 Pan troglodytes ENSPTRG00000023917 I 0.804
ENSPANG00000015944 Papio anubis ENSPANG00000015944 I 0.804
ENSNLEG00000003700 Nomascus leucogenys ENSNLEG00000003700 I 0.804
ENSPPYG00000018150 Pongo abelii ENSPPYG00000018150 I 0.804
ZNF398 Gorilla gorilla ENSGGOG00000005812 I 0.804
ENSP00000338984 Macaca fascicularis ENSP00000338984 I 0.804
ENSCSAG00000007015 Chlorocebus sabaeus ENSCSAG00000007015 I 0.804
ZNF398 Callithrix jacchus ENSCJAG00000010213 I 0.804
ZNF398 Homo sapiens ENSG00000197024 D 0.804
ZNF398 Oryctolagus cuniculus ENSOCUG00000008416 I 0.803
ZNF398 Otolemur garnettii ENSOGAG00000016740 I 0.801
ZNF398 Ochotona princeps ENSOPRG00000010531 I 0.800
ZNF398 Canis familiaris ENSCAFG00000004429 I 0.799
ZNF398 Dasypus novemcinctus ENSDNOG00000038814 I 0.799
ENSMICG00000016618 Microcebus murinus ENSMICG00000016618 I 0.798
ENSMPUG00000006622 Mustela putorius furo ENSMPUG00000006622 I 0.793
ZNF398 Myotis lucifugus ENSMLUG00000007451 I 0.785
Myotis_brandtii_ZNF398_10025637 Myotis brandtii Myotis_brandtii_ZNF398_10025637 I 0.785
ZNF398 Choloepus hoffmanni ENSCHOG00000007407 I 0.771
ZNF398 Bos taurus ENSBTAG00000020445 I 0.769