Zfp398 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000006703 T108912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF398
M07716_2.00 		Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData 		0.804 0.962
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000008743 C2H2 ZF 344 365
ENSRNOP00000008743 C2H2 ZF 400 421
ENSRNOP00000008743 C2H2 ZF 428 450
ENSRNOP00000008743 C2H2 ZF 456 478
ENSRNOP00000008743 C2H2 ZF 484 506
ENSRNOP00000008743 C2H2 ZF 512 534
ENSRNOP00000008743 C2H2 ZF 540 562
ENSRNOP00000008743 C2H2 ZF 568 591

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action