CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC102555183
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000006796
T108916_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF146
M08329_2.00
Homo sapiens
GCTGHVTARTAYTCC
GGARTAYTABDCAGC
ChIP-seq
Schmitges et al.(2016)
Q15072_6-10.RCADE
0.820
0.978
ZNF146
M08913_2.00
Homo sapiens
TTTTYATGGCTGHRTARTATTCCA
TGGAATAYTAYDCAGCCATRAAAA
Misc
Kulakovskiy et al.(2013)
OZF_HUMAN.H11MO.0.C
0.820
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000008889
C2H2 ZF
16
38
FACKVCGILFSHKSNLTEHEHFH
ENSRNOP00000008889
C2H2 ZF
44
66
FECNECGKAFSQKQYVIKHQNTH
ENSRNOP00000008889
C2H2 ZF
72
94
FECNDCGKSFSQKENLLTHQKIH
ENSRNOP00000008889
C2H2 ZF
100
122
FECKDCGKAFIQKSNLIRHQRTH
ENSRNOP00000008889
C2H2 ZF
128
150
FICKECGKTFSGKSNLTEHEKIH
ENSRNOP00000008889
C2H2 ZF
156
178
FKCNECGTAFGQKKYLIKHQNIH
ENSRNOP00000008889
C2H2 ZF
184
206
YECNECGKAFSQRTSLIVHVRIH
ENSRNOP00000008889
C2H2 ZF
212
234
YECNVCGKAFSQSSSLTVHVRSH
ENSRNOP00000008889
C2H2 ZF
240
262
YGCNECGKAFSQFSTLALHLRIH
ENSRNOP00000008889
C2H2 ZF
268
290
YQCSECGKAFSQKSHHIRHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zfp146
Mus musculus
ENSMUSG00000037029
I
0.824
ZNF146
Canis familiaris
ENSCAFG00000031807
I
0.821
ENSCJAG00000009524
Callithrix jacchus
ENSCJAG00000009524
I
0.821
ENSPANG00000010104
Papio anubis
ENSPANG00000010104
I
0.820
ENSNLEG00000018757
Nomascus leucogenys
ENSNLEG00000018757
I
0.820
ENSPPYG00000009900
Pongo abelii
ENSPPYG00000009900
I
0.820
ZNF146
Pan troglodytes
ENSPTRG00000010891
I
0.820
Myotis_brandtii_ZNF146_10035128
Myotis brandtii
Myotis_brandtii_ZNF146_10035128
I
0.820
ENSP00000392095
Macaca fascicularis
ENSP00000392095
I
0.820
ENSGGOG00000028134
Gorilla gorilla
ENSGGOG00000028134
I
0.820
ZNF146
Myotis lucifugus
ENSMLUG00000012528
I
0.820
ENSGGOG00000027065
Gorilla gorilla
ENSGGOG00000027065
I
0.820
ENSCSAG00000004229
Chlorocebus sabaeus
ENSCSAG00000004229
I
0.820
ZNF146
Homo sapiens
ENSG00000167635
D
0.820
ZNF146
Equus caballus
ENSECAG00000005248
I
0.820
ZNF146
Vicugna pacos
ENSVPAG00000000430
I
0.819
ENSCJAG00000000542
Callithrix jacchus
ENSCJAG00000000542
I
0.817
ZNF146
Macaca mulatta
ENSMMUG00000028785
I
0.816
ENSCHOG00000005510
Choloepus hoffmanni
ENSCHOG00000005510
I
0.815
ENSCHOG00000000510
Choloepus hoffmanni
ENSCHOG00000000510
I
0.813
ZNF146
Loxodonta africana
ENSLAFG00000002096
I
0.807
ENSBTAP00000042366-D7
Bos grunniens
ENSBTAP00000042366-D7
I
0.804
ENSBTAG00000031687
Bos taurus
ENSBTAG00000031687
I
0.804
ZNF146
Ochotona princeps
ENSOPRG00000001810
I
0.800
ZNF146
Sus scrofa
ENSSSCG00000025355
I
0.798
ZNF146
Tursiops truncatus
ENSTTRG00000005907
I
0.798
ZNF146
Erinaceus europaeus
ENSEEUG00000007396
I
0.792