Ovol2 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000006850 T108917_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN

NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.827 0.989
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.813 0.957
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN

NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.813 0.957
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.813 0.957
OVOL2
M10207_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.813 0.957
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN

NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.813 0.957
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.813 0.957
OVOL2
M00234_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_D228E
0.758 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000061477 C2H2 ZF 85 107
ENSRNOP00000061477 C2H2 ZF 113 135
ENSRNOP00000061477 C2H2 ZF 141 164
ENSRNOP00000061477 C2H2 ZF 180 203

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action