Zfp12 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000006958 T108919_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF12
M04515_2.00 		Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN		 SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX 		0.800 0.957
ZNF12
M07611_2.00 		Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping 		0.800 0.957
ZNF12
M04516_2.00 		Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN		 SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX 		0.800 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000038579 C2H2 ZF 174 196
ENSRNOP00000038579 C2H2 ZF 202 224
ENSRNOP00000038579 C2H2 ZF 230 252
ENSRNOP00000038579 C2H2 ZF 258 280
ENSRNOP00000038579 C2H2 ZF 286 308
ENSRNOP00000038579 C2H2 ZF 314 336
ENSRNOP00000038579 C2H2 ZF 342 364
ENSRNOP00000038579 C2H2 ZF 370 392
ENSRNOP00000038579 C2H2 ZF 398 420
ENSRNOP00000038579 C2H2 ZF 426 448
ENSRNOP00000038579 C2H2 ZF 454 476
ENSRNOP00000038579 C2H2 ZF 482 504
ENSRNOP00000038579 C2H2 ZF 510 532
ENSRNOP00000038579 C2H2 ZF 538 560
ENSRNOP00000038579 C2H2 ZF 566 588

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

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30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action