CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp189
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000006972
T108920_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF189
M08311_2.00
Homo sapiens
VDGGAASRGMVDNDSNNN
NNNSHNHBKCYSTTCCHB
ChIP-seq
Schmitges et al.(2016)
O75820_5-10.RCADE
0.818
0.978
ZNF189
M07589_2.00
Homo sapiens
NBKCBSTTCCHB
VDGGAASVGMVN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF189.RCADE.ReprocessedData
0.818
0.978
ZNF189
M08244_2.00
Homo sapiens
TGGAAAA
TTTTCCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF189
0.818
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000009584
C2H2 ZF
130
152
HKCEECGKRFVRKAHFIQHQRVH
ENSRNOP00000009584
C2H2 ZF
158
180
FQCNECGKSFSRSSFVIEHQRIH
ENSRNOP00000009584
C2H2 ZF
186
208
YECNYCGKTFSVSSTLIRHQRIH
ENSRNOP00000009584
C2H2 ZF
214
236
YQCNQCKQSFSQRRSLVKHQRIH
ENSRNOP00000009584
C2H2 ZF
242
264
HKCSDCGKAFSWKSHLIEHQRTH
ENSRNOP00000009584
C2H2 ZF
270
292
YHCTKCKKSFSRNSLLVEHQRIH
ENSRNOP00000009584
C2H2 ZF
298
320
HKCGECGKAFRLSTYLIQHQKIH
ENSRNOP00000009584
C2H2 ZF
326
348
FLCIECGKSFSRSSFLIEHQRIH
ENSRNOP00000009584
C2H2 ZF
354
376
YQCQECGKSFSQLCNLTRHQRIH
ENSRNOP00000009584
C2H2 ZF
382
404
HKCEECGKAFSRSSGLIQHQRIH
ENSRNOP00000009584
C2H2 ZF
438
460
YKCDDCGKTFSVSAHLVQHQRIH
ENSRNOP00000009584
C2H2 ZF
466
488
YLCTVCGKSFSRSSFLIEHQRIH
ENSRNOP00000009584
C2H2 ZF
494
516
YLCRQCGKSFSQLCNLIRHQGVH
ENSRNOP00000009584
C2H2 ZF
522
544
HKCEECGKAFSRNSGLIQHQRIH
ENSRNOP00000009584
C2H2 ZF
550
572
YRCEKCDKSFSQQRSLVNHQKIH
ENSRNOP00000009584
C2H2 ZF
581
603
YECDACGEAFTCQISLIQHQKLH
ENSRNOP00000071391
C2H2 ZF
124
146
HKCEECGKRFVRKAHFIQHQRVH
ENSRNOP00000071391
C2H2 ZF
152
174
FQCNECGKSFSRSSFVIEHQRIH
ENSRNOP00000071391
C2H2 ZF
180
202
YECNYCGKTFSVSSTLIRHQRIH
ENSRNOP00000071391
C2H2 ZF
208
230
YQCNQCKQSFSQRRSLVKHQRIH
ENSRNOP00000071391
C2H2 ZF
236
258
HKCSDCGKAFSWKSHLIEHQRTH
ENSRNOP00000071391
C2H2 ZF
264
286
YHCTKCKKSFSRNSLLVEHQRIH
ENSRNOP00000071391
C2H2 ZF
292
314
HKCGECGKAFRLSTYLIQHQKIH
ENSRNOP00000071391
C2H2 ZF
320
342
FLCIECGKSFSRSSFLIEHQRIH
ENSRNOP00000071391
C2H2 ZF
348
370
YQCQECGKSFSQLCNLTRHQRIH
ENSRNOP00000071391
C2H2 ZF
376
398
HKCEECGKAFSRSSGLIQHQRIH
ENSRNOP00000071391
C2H2 ZF
432
454
YKCDDCGKTFSVSAHLVQHQRIH
ENSRNOP00000071391
C2H2 ZF
460
482
YLCTVCGKSFSRSSFLIEHQRIH
ENSRNOP00000071391
C2H2 ZF
488
510
YLCRQCGKSFSQLCNLIRHQGVH
ENSRNOP00000071391
C2H2 ZF
516
538
HKCEECGKAFSRNSGLIQHQRIH
ENSRNOP00000071391
C2H2 ZF
544
566
YRCEKCDKSFSQQRSLVNHQKIH
ENSRNOP00000071391
C2H2 ZF
575
597
YECDACGEAFTCQISLIQHQKLH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy