Zfp189 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000006972 T108920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF189
M08311_2.00
Homo sapiens
VDGGAASRGMVDNDSNNN

NNNSHNHBKCYSTTCCHB
ChIP-seq
Schmitges et al.(2016)
O75820_5-10.RCADE
0.818 0.978
ZNF189
M07589_2.00
Homo sapiens
NBKCBSTTCCHB

VDGGAASVGMVN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF189.RCADE.ReprocessedData
0.818 0.978
ZNF189
M08244_2.00
Homo sapiens
TGGAAAA

TTTTCCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF189
0.818 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000009584 C2H2 ZF 130 152
ENSRNOP00000009584 C2H2 ZF 158 180
ENSRNOP00000009584 C2H2 ZF 186 208
ENSRNOP00000009584 C2H2 ZF 214 236
ENSRNOP00000009584 C2H2 ZF 242 264
ENSRNOP00000009584 C2H2 ZF 270 292
ENSRNOP00000009584 C2H2 ZF 298 320
ENSRNOP00000009584 C2H2 ZF 326 348
ENSRNOP00000009584 C2H2 ZF 354 376
ENSRNOP00000009584 C2H2 ZF 382 404
ENSRNOP00000009584 C2H2 ZF 438 460
ENSRNOP00000009584 C2H2 ZF 466 488
ENSRNOP00000009584 C2H2 ZF 494 516
ENSRNOP00000009584 C2H2 ZF 522 544
ENSRNOP00000009584 C2H2 ZF 550 572
ENSRNOP00000009584 C2H2 ZF 581 603
ENSRNOP00000071391 C2H2 ZF 124 146
ENSRNOP00000071391 C2H2 ZF 152 174
ENSRNOP00000071391 C2H2 ZF 180 202
ENSRNOP00000071391 C2H2 ZF 208 230
ENSRNOP00000071391 C2H2 ZF 236 258
ENSRNOP00000071391 C2H2 ZF 264 286
ENSRNOP00000071391 C2H2 ZF 292 314
ENSRNOP00000071391 C2H2 ZF 320 342
ENSRNOP00000071391 C2H2 ZF 348 370
ENSRNOP00000071391 C2H2 ZF 376 398
ENSRNOP00000071391 C2H2 ZF 432 454
ENSRNOP00000071391 C2H2 ZF 460 482
ENSRNOP00000071391 C2H2 ZF 488 510
ENSRNOP00000071391 C2H2 ZF 516 538
ENSRNOP00000071391 C2H2 ZF 544 566
ENSRNOP00000071391 C2H2 ZF 575 597

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

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37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action