Gli2 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000007261 T108925_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gli2
M01024_2.00
Mus musculus
NGACCACCYN

NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.827 1.000
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB

VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.827 1.000
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR

YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.827 1.000
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN

NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.827 1.000
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG

CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.827 1.000
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG

CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.827 1.000
GLI2
M10114_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.827 1.000
GLI2
M10115_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.827 1.000
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG

CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.827 1.000
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG

CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.807 0.930
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK

MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.807 0.930
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV

BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.807 0.930
GLI3
M10167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.807 0.930
GLI3
M10168_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.807 0.930
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY

RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.807 0.930
Gli1
M01023_2.00
Mus musculus
NGACCACCHN

NDGGTGGTCN
PBM
Peterson et al.(2012)
Gli1
0.779 0.843
GLI1
M02643_2.00
Homo sapiens
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI1
0.779 0.843
Gli1
M08976_2.00
Mus musculus
RGRCCACCCASV

BSTGGGTGGYCY
Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C
0.779 0.843
GLI1
M10176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q2
0.779 0.843
GLI1
M10177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3_01
0.779 0.843
GLI1
M10178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3
0.779 0.843
GLI1
M10179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI_Q6
0.779 0.843
Gli3
M01022_2.00
Mus musculus
NGACCACCCNN

NNGGGTGGTCN
PBM
Peterson et al.(2012)
Gli3
0.761 0.930
Gli3
M08023_2.00
Mus musculus
RGVCCACCCAS

STGGGTGGBCY
ChIP-seq
Chen et al.(2011)
GSE11062_Gli3
0.761 0.930
Gli3
M09512_2.00
Mus musculus
RGACCACCCASR

YSTGGGTGGTCY
Misc
Heinz et al.(2010)
Limb-GLI3_GSE11077
0.761 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000009963 C2H2 ZF 419 444
ENSRNOP00000009963 C2H2 ZF 452 479
ENSRNOP00000009963 C2H2 ZF 485 509
ENSRNOP00000009963 C2H2 ZF 515 540
ENSRNOP00000009963 C2H2 ZF 546 571

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003640 Calypte anna Aan_R003640 I 0.813
Aan_R014715 Calypte anna Aan_R014715 I 0.807
Afo_R006826 Aptenodytes forsteri Afo_R006826 I 0.813
Afo_R007816 Aptenodytes forsteri Afo_R007816 I 0.807
Brh_R008256 Buceros rhinoceros Brh_R008256 I 0.807
Brh_R010932 Buceros rhinoceros Brh_R010932 I 0.813
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I 0.807
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I 0.813
GLI2 Anolis carolinensis ENSACAG00000004133 I 0.813
GLI1 Anolis carolinensis ENSACAG00000006541 I 0.805
GLI3 Anolis carolinensis ENSACAG00000017547 I 0.807
ENSAMEG00000004878 Ailuropoda melanoleuca ENSAMEG00000004878 I 0.779
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I 0.807
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I 0.827
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I 0.807
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I 0.813
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I 0.813
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I 0.805
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I 0.807
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I 0.805
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I 0.813
GLI1 Bos taurus ENSBTAG00000006631 I 0.779
GLI3 Bos taurus ENSBTAG00000010671 I 0.807
GLI2 Bos taurus ENSBTAG00000011682 I 0.827
ENSBTAP00000008704-D1 Bos grunniens ENSBTAP00000008704-D1 I 0.779
GLI1 Canis familiaris ENSCAFG00000000223 I 0.779
GLI3 Canis familiaris ENSCAFG00000003535 I 0.807
GLI2 Canis familiaris ENSCAFG00000004821 I 0.827
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I 0.807
ENSCING00000012018 Ciona intestinalis ENSCING00000012018 I 0.793
ENSCJAG00000003076 Callithrix jacchus ENSCJAG00000003076 I 0.787
GLI1 Callithrix jacchus ENSCJAG00000007324 I 0.779
GLI3 Callithrix jacchus ENSCJAG00000007690 I 0.807
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I 0.827
GLI1 Cavia porcellus ENSCPOG00000005414 I 0.779
GLI3 Cavia porcellus ENSCPOG00000013233 I 0.761
GLI2 Cavia porcellus ENSCPOG00000015189 I 0.827
ENSCSAG00000004897 Chlorocebus sabaeus ENSCSAG00000004897 I 0.779
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I 0.807
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I 0.827
ENSCSAVG00000009575 Ciona savignyi ENSCSAVG00000009575 I 0.793
gli2b Danio rerio ENSDARG00000020884 I 0.813
gli2a Danio rerio ENSDARG00000025641 I 0.763
gli3 Danio rerio ENSDARG00000052131 I 0.807
gli1 Danio rerio ENSDARG00000101244 I 0.815
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I 0.827
GLI1 Dasypus novemcinctus ENSDNOG00000017512 I 0.779
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I 0.807
Gli1 Dipodomys ordii ENSDORG00000007124 I 0.779
ENSECAG00000008016 Equus caballus ENSECAG00000008016 I 0.817
GLI3 Equus caballus ENSECAG00000009281 I 0.807
GLI1 Equus caballus ENSECAG00000011246 I 0.779
GLI3 Echinops telfairi ENSETEG00000003955 I 0.791
GLI1 Echinops telfairi ENSETEG00000006674 I 0.781
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I 0.807
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I 0.813
GLI1 Felis catus ENSFCAG00000002081 I 0.779
GLI3 Felis catus ENSFCAG00000011989 I 0.807
GLI2 Felis catus ENSFCAG00000014531 I 0.827
GLI2 Homo sapiens ENSG00000074047 D 0.827
GLI3 Homo sapiens ENSG00000106571 D 0.807
GLI1 Homo sapiens ENSG00000111087 D 0.779
gli2b Gasterosteus aculeatus ENSGACG00000001547 I 0.757
ENSGACG00000004834 Gasterosteus aculeatus ENSGACG00000004834 I 0.779
gli1 Gasterosteus aculeatus ENSGACG00000006458 I 0.759
GLI2 Gallus gallus ENSGALG00000011630 I 0.813
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I 0.807
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I 0.815
GLI1 Gorilla gorilla ENSGGOG00000001974 I 0.779
GLI3 Gorilla gorilla ENSGGOG00000002026 I 0.807
GLI2 Gorilla gorilla ENSGGOG00000009653 I 0.823
ENSGMOG00000007975 Gadus morhua ENSGMOG00000007975 I 0.759
ENSGMOG00000010335 Gadus morhua ENSGMOG00000010335 I 0.764
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I 0.807
GLI3 Loxodonta africana ENSLAFG00000008944 I 0.807
GLI1 Loxodonta africana ENSLAFG00000022910 I 0.779
ENSLOCG00000002028 Lepisosteus oculatus ENSLOCG00000002028 I 0.767
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I 0.805
ENSLOCG00000011983 Lepisosteus oculatus ENSLOCG00000011983 I 0.817
ENSMEUG00000009702 Macropus eugenii ENSMEUG00000009702 I 0.779
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I 0.807
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I 0.815
GLI2 Meleagris gallopavo ENSMGAG00000011872 I 0.813
GLI3 Meleagris gallopavo ENSMGAG00000012277 I 0.807
GLI3 Microcebus murinus ENSMICG00000010785 I 0.791
GLI1 Myotis lucifugus ENSMLUG00000001013 I 0.779
GLI3 Myotis lucifugus ENSMLUG00000015711 I 0.807
GLI2 Macaca mulatta ENSMMUG00000001868 I 0.827
GLI3 Macaca mulatta ENSMMUG00000013614 I 0.807
GLI1 Macaca mulatta ENSMMUG00000022058 I 0.779
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I 0.827
GLI2 Monodelphis domestica ENSMODG00000000245 I 0.822
GLI3 Monodelphis domestica ENSMODG00000002714 I 0.807
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I 0.827
ENSMPUG00000001825 Mustela putorius furo ENSMPUG00000001825 I 0.779
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I 0.807
Gli3 Mus musculus ENSMUSG00000021318 D 0.761
Gli1 Mus musculus ENSMUSG00000025407 D 0.779
Gli2 Mus musculus ENSMUSG00000048402 D 0.827
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I 0.827
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I 0.807
ENSNLEG00000017337 Nomascus leucogenys ENSNLEG00000017337 I 0.779
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I 0.807
ENSOARG00000006674 Ovis aries ENSOARG00000006674 I 0.779
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I 0.827
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I 0.807
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I 0.827
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I 0.807
GLI1 Oryctolagus cuniculus ENSOCUG00000011128 I 0.779
GLI1 Otolemur garnettii ENSOGAG00000005219 I 0.779
GLI3 Otolemur garnettii ENSOGAG00000012651 I 0.807
GLI2 Otolemur garnettii ENSOGAG00000032438 I 0.822
ENSONIG00000003608 Oreochromis niloticus ENSONIG00000003608 I 0.767
ENSONIG00000004472 Oreochromis niloticus ENSONIG00000004472 I 0.767
ENSONIG00000005084 Oreochromis niloticus ENSONIG00000005084 I 0.757
ENSONIG00000006298 Oreochromis niloticus ENSONIG00000006298 I 0.779
GLI1 Ochotona princeps ENSOPRG00000006483 I 0.779
GLI3 Ochotona princeps ENSOPRG00000011225 I 0.807
gli1 Oryzias latipes ENSORLG00000005455 I 0.757
gli2b Oryzias latipes ENSORLG00000012490 I 0.779
ENSP00000228682 Macaca fascicularis ENSP00000228682 I 0.779
ENSP00000379258 Macaca fascicularis ENSP00000379258 I 0.807
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I 0.827
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I 0.807
ENSPANG00000017044 Papio anubis ENSPANG00000017044 I 0.779
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I 0.827
GLI2 Procavia capensis ENSPCAG00000001704 I 0.825
GLI3 Procavia capensis ENSPCAG00000015092 I 0.807
GLI1 Procavia capensis ENSPCAG00000015756 I 0.775
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I 0.812
ENSPFOG00000006269 Poecilia formosa ENSPFOG00000006269 I 0.757
ENSPFOG00000014778 Poecilia formosa ENSPFOG00000014778 I 0.766
ENSPFOG00000019294 Poecilia formosa ENSPFOG00000019294 I 0.779
ENSPPYG00000004689 Pongo abelii ENSPPYG00000004689 I 0.779
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I 0.827
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I 0.807
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I 0.813
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I 0.807
GLI1 Pan troglodytes ENSPTRG00000005133 I 0.779
GLI2 Pan troglodytes ENSPTRG00000012413 I 0.827
GLI3 Pan troglodytes ENSPTRG00000019117 I 0.807
GLI1 Pteropus vampyrus ENSPVAG00000012109 I 0.779
GLI3 Pteropus vampyrus ENSPVAG00000015920 I 0.807
Gli3 Rattus norvegicus ENSRNOG00000014395 I 0.761
Gli1 Rattus norvegicus ENSRNOG00000025120 I 0.779
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I 0.822
ENSSHAG00000006652 Sarcophilus harrisii ENSSHAG00000006652 I 0.779
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I 0.807
GLI2 Sus scrofa ENSSSCG00000015733 I 0.827
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I 0.827
ENSSTOG00000020366 Ictidomys tridecemlineatus ENSSTOG00000020366 I 0.779
ENSSTOG00000020844 Ictidomys tridecemlineatus ENSSTOG00000020844 I 0.761
GLI3 Tupaia belangeri ENSTBEG00000006673 I 0.807
ENSTGUG00000001834 Taeniopygia guttata ENSTGUG00000001834 I 0.761
GLI2 Taeniopygia guttata ENSTGUG00000004599 I 0.813
gli1 Tetraodon nigroviridis ENSTNIG00000007058 I 0.759
gli2b Tetraodon nigroviridis ENSTNIG00000010251 I 0.801
gli2b Tetraodon nigroviridis ENSTNIG00000013668 I 0.779
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I 0.803
gli2b Takifugu rubripes ENSTRUG00000001954 I 0.757
gli2b Takifugu rubripes ENSTRUG00000007692 I 0.779
gli2b Takifugu rubripes ENSTRUG00000010444 I 0.813
gli1 Takifugu rubripes ENSTRUG00000014998 I 0.759
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I 0.807
GLI2 Tursiops truncatus ENSTTRG00000002058 I 0.813
GLI3 Tursiops truncatus ENSTTRG00000003628 I 0.807
GLI1 Tursiops truncatus ENSTTRG00000013086 I 0.779
ENSXMAG00000001777 Xiphophorus maculatus ENSXMAG00000001777 I 0.779
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I 0.812
ENSXMAG00000017965 Xiphophorus maculatus ENSXMAG00000017965 I 0.757
Gfo_R001212 Geospiza fortis Gfo_R001212 I 0.813
Gfo_R007869 Geospiza fortis Gfo_R007869 I 0.807
Gfo_R013682 Geospiza fortis Gfo_R013682 I 0.805
HelroG111329 Helobdella robusta HelroG111329 I 0.760
Myotis_brandtii_GLI1_10018379 Myotis brandtii Myotis_brandtii_GLI1_10018379 I 0.779
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I 0.827
Ogr02489 Ophisaurus gracilis Ogr02489 I 0.813
Pvit_05813 Pogona vitticeps Pvit_05813 I 0.805
Pvit_06470 Pogona vitticeps Pvit_06470 I 0.813
Pvit_19093 Pogona vitticeps Pvit_19093 I 0.807
Tal_R006208 Tyto alba Tal_R006208 I 0.813
Tal_R009020 Tyto alba Tal_R009020 I 0.805
gli2.L Xenopus laevis XB-GENE-17342592 I 0.769
gli1 Xenopus tropicalis XB-GENE-482644 I 0.761
gli2.S Xenopus laevis XB-GENE-6251939 I 0.771
gli1.S Xenopus laevis XB-GENE-864895 I 0.761
gli3.L Xenopus laevis XB-GENE-865509 I 0.807
XP_002933449 Xenopus tropicalis XP_002933449 I 0.807
XP_002933450 Xenopus tropicalis XP_002933450 I 0.807