CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zbtb48
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000009595
T108955_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB48
M08391_2.00
Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD
ChIP-seq
Schmitges et al.(2016)
P10074.MEME
0.827
0.996
ZBTB48
M08956_2.00
Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV
Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C
0.827
0.996
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000012745
C2H2 ZF
286
308
VECPTCHKKFLSKYYLKVHNRKH
ENSRNOP00000012745
C2H2 ZF
314
335
FECPKCGKCYFRKENLLEHEAR
ENSRNOP00000012745
C2H2 ZF
345
367
FTCSVCQETFRRRMELRVHMVSH
ENSRNOP00000012745
C2H2 ZF
373
396
YKCSSCSQQFMQKKDLQSHMIKLH
ENSRNOP00000012745
C2H2 ZF
431
454
FVCEECGHRASSRNGLQMHIKAKH
ENSRNOP00000012745
C2H2 ZF
460
482
YVCEFCSHAFTQKANLNMHLRTH
ENSRNOP00000012745
C2H2 ZF
488
510
FQCHLCGKTFRTQASLDKHNRTH
ENSRNOP00000012745
C2H2 ZF
516
539
FSCEFCEQRFTEKGPLLRHVASRH
ENSRNOP00000012745
C2H2 ZF
545
567
HFCQICGKTFKAVEQLRVHVRRH
ENSRNOP00000012745
C2H2 ZF
573
595
FECTECGYKFTRQAHLRRHMEIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy