Zbtb48 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000009595 T108955_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity; identical protein binding activity; and sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated; regulation of transcription by RNA polymerase II; and telomere maintenance via telomere lengthening. Predicted to be located in chromosome, telomeric region. Orthologous to human ZBTB48 (zinc finger and BTB domain containing 48). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB48
M08391_2.00 		Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD		 ChIP-seq
Schmitges et al.(2016)
P10074.MEME 		0.827 0.996
ZBTB48
M08956_2.00 		Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV		 Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C 		0.827 0.996
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000012745 C2H2 ZF 286 308
ENSRNOP00000012745 C2H2 ZF 314 335
ENSRNOP00000012745 C2H2 ZF 345 367
ENSRNOP00000012745 C2H2 ZF 373 396
ENSRNOP00000012745 C2H2 ZF 431 454
ENSRNOP00000012745 C2H2 ZF 460 482
ENSRNOP00000012745 C2H2 ZF 488 510
ENSRNOP00000012745 C2H2 ZF 516 539
ENSRNOP00000012745 C2H2 ZF 545 567
ENSRNOP00000012745 C2H2 ZF 573 595

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action