CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Zbtb17
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000010436
T108960_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb17
M08967_2.00
Mus musculus
SBKCCCCKCCCCCNCBBBS
SVVVGNGGGGGMGGGGMVS
Misc
Kulakovskiy et al.(2013)
ZBT17_MOUSE.H11MO.0.A
0.827
1.000
ZBTB17
M08878_2.00
Homo sapiens
YHKYYCHKCCYYCWBYYNN
NNRRVWGRRGGMDGRRMDR
Misc
Kulakovskiy et al.(2013)
ZBT17_HUMAN.H11MO.0.A
0.824
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000014399
C2H2 ZF
304
326
HKCEDCGKEFTHTGNFKRHIRIH
ENSRNOP00000014399
C2H2 ZF
332
354
FSCRECSKAFSDPAACKAHEKTH
ENSRNOP00000014399
C2H2 ZF
360
382
YGCEECGKSYRLISLLNLHKKRH
ENSRNOP00000014399
C2H2 ZF
388
410
YRCGDCGKLFTTSGNLKRHQLVH
ENSRNOP00000014399
C2H2 ZF
416
438
YQCDYCGRSFSDPTSKMRHLETH
ENSRNOP00000014399
C2H2 ZF
444
466
HKCPHCDKKFNQVGNLKAHLKIH
ENSRNOP00000014399
C2H2 ZF
472
494
LKCRECGKQFTTSGNLKRHLRIH
ENSRNOP00000014399
C2H2 ZF
500
522
YVCTHCQRQFADPGALQRHVRIH
ENSRNOP00000014399
C2H2 ZF
528
550
CQCVICGKAFTQASSLIAHVRQH
ENSRNOP00000014399
C2H2 ZF
556
578
YVCERCGKRFVQSSQLANHIRHH
ENSRNOP00000014399
C2H2 ZF
584
606
HKCSVCSKAFVNVGDLSKHIIIH
ENSRNOP00000014399
C2H2 ZF
612
635
YLCDKCGRGFNRVDNLRSHVKTVH
ENSRNOP00000071596
C2H2 ZF
304
326
HKCEDCGKEFTHTGNFKRHIRIH
ENSRNOP00000071596
C2H2 ZF
332
354
FSCRECSKAFSDPAACKAHEKTH
ENSRNOP00000071596
C2H2 ZF
360
382
YGCEECGKSYRLISLLNLHKKRH
ENSRNOP00000071596
C2H2 ZF
388
410
YRCGDCGKLFTTSGNLKRHQLVH
ENSRNOP00000071596
C2H2 ZF
416
438
YQCDYCGRSFSDPTSKMRHLETH
ENSRNOP00000071596
C2H2 ZF
444
466
HKCPHCDKKFNQVGNLKAHLKIH
ENSRNOP00000071596
C2H2 ZF
472
494
LKCRECGKQFTTSGNLKRHLRIH
ENSRNOP00000071596
C2H2 ZF
500
522
YVCTHCQRQFADPGALQRHVRIH
ENSRNOP00000071596
C2H2 ZF
528
550
CQCVICGKAFTQASSLIAHVRQH
ENSRNOP00000071596
C2H2 ZF
556
578
YVCERCGKRFVQSSQLANHIRHH
ENSRNOP00000071596
C2H2 ZF
584
606
HKCSVCSKAFVNVGDLSKHIIIH
ENSRNOP00000071596
C2H2 ZF
612
635
YLCDKCGRGFNRVDNLRSHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy