CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC108348302
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000011492
T108967_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable metal ion binding activity. Orthologous to human ZNF124 (zinc finger protein 124). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000029094
C2H2 ZF
161
183
YSCNQCGKVLSSSSSLQRHERIH
ENSRNOP00000029094
C2H2 ZF
189
211
YKCQQCGKALSSSTSLQRHERIH
ENSRNOP00000029094
C2H2 ZF
217
239
YKCQQCGKAFRCHSALQLHERIH
ENSRNOP00000029094
C2H2 ZF
245
267
YECQQCGKAFTCHSYLRLHERTH
ENSRNOP00000029094
C2H2 ZF
273
295
YECKQCGKAFRCQTSYHRHKIIH
ENSRNOP00000029094
C2H2 ZF
301
323
YECKQCSRLFIYPSLLQMHERTH
ENSRNOP00000029094
C2H2 ZF
329
351
YKCKECGKSFLYPSLLQMHERTH
ENSRNOP00000029094
C2H2 ZF
357
379
YECKQCGTAFRHHSSLRLHERTH
ENSRNOP00000029094
C2H2 ZF
385
407
YECQQCGKAFTRHTSLRLHEITH
ENSRNOP00000029094
C2H2 ZF
413
435
YKCKECGKAFRHHSSLRLHGRNH
ENSRNOP00000029094
C2H2 ZF
441
463
YECKQCDKAFIRYSYLRLHERTH
ENSRNOP00000029094
C2H2 ZF
469
490
YECKQCGKAFSRHSSFQRHKSH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy