Znf740 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000012192 T108971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN

NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.827 1.000
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN

NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.827 1.000
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH

DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.827 1.000
ZNF740
M02891_2.00
Homo sapiens
VCCCCCCCMY

RKGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_1
0.807 0.956
ZNF740
M02892_2.00
Homo sapiens
VCCCCCCCAY

RTGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_2
0.807 0.956
ZNF740
M04467_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX
0.807 0.956
ZNF740
M04469_2.00
Homo sapiens
NYNCCCCCCCCAC

GTGGGGGGGGNRN
SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX
0.807 0.956
ZNF740
M10221_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF740_02
0.807 0.956
ZNF740
M04468_2.00
Homo sapiens
YYDCCCCCCCCAY

RTGGGGGGGGHRR
SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX
0.807 0.956
ZNF740
M04470_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX
0.807 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000016240 C2H2 ZF 113 135
ENSRNOP00000016240 C2H2 ZF 141 163
ENSRNOP00000016240 C2H2 ZF 169 190

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HMGB13 Arabidopsis thaliana AT4G11080 D 0.000
gene32050-v1.0-hybrid Fragaria vesca gene32050-v1.0-hybrid I 0.000
evm.TU.supercontig_122.41 Carica papaya evm.TU.supercontig_122.41 I 0.000
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.000
Ciclev10023918m.g Citrus clementina Ciclev10023918m.g I 0.000
Carubv10007590m.g Capsella rubella Carubv10007590m.g I 0.000
Carubv10000930m.g Capsella rubella Carubv10000930m.g I 0.000
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I 0.000
Cagra.1226s0043 Capsella grandiflora Cagra.1226s0043 I 0.000
Bostr.7867s0182 Boechera stricta Bostr.7867s0182 I 0.000
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I 0.000
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.000
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.000
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I 0.000
PK10992.1 Cannabis sativa PK10992.1 I 0.000
Thhalv10028648m.g Eutrema salsugineum Thhalv10028648m.g I 0.000
Thhalv10025168m.g Eutrema salsugineum Thhalv10025168m.g I 0.000
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.000
MDP0000268093 Malus domestica MDP0000268093 I 0.000
Lus10032379.g Linum usitatissimum Lus10032379.g I 0.000
Lus10003904.g Linum usitatissimum Lus10003904.g I 0.000
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
Cucsa.107270 Cucumis sativus Cucsa.107270 I 0.000
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I 0.000
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.000
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I 0.000
MTR_8g099305 Medicago truncatula MTR_8g099305 I 0.000
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
Bra035256 Brassica rapa Bra035256 I 0.000
Bra013731 Brassica rapa Bra013731 I 0.000
Bo1g037180 Brassica oleracea Bo1g037180 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
30190.m010807 Ricinus communis 30190.m010807 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
Cla011101 Citrullus lanatus Cla011101 I 0.000
Ca_05811 Cicer arietinum Ca_05811 I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000
HMGB6 Arabidopsis thaliana AT4G23800 I 0.000
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I 0.000
Si017040m.g Setaria italica Si017040m.g I 0.000
Lus10033951.g Linum usitatissimum Lus10033951.g N 0.000
GLYMA08G02550 Glycine max GLYMA08G02550 N 0.000