Znf740 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000012192 T108971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN

NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.827 1.000
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN

NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.827 1.000
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH

DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.827 1.000
ZNF740
M02891_2.00
Homo sapiens
VCCCCCCCMY

RKGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_1
0.807 0.956
ZNF740
M02892_2.00
Homo sapiens
VCCCCCCCAY

RTGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_2
0.807 0.956
ZNF740
M04467_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX
0.807 0.956
ZNF740
M04469_2.00
Homo sapiens
NYNCCCCCCCCAC

GTGGGGGGGGNRN
SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX
0.807 0.956
ZNF740
M10221_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF740_02
0.807 0.956
ZNF740
M04468_2.00
Homo sapiens
YYDCCCCCCCCAY

RTGGGGGGGGHRR
SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX
0.807 0.956
ZNF740
M04470_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX
0.807 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000016240 C2H2 ZF 113 135
ENSRNOP00000016240 C2H2 ZF 141 163
ENSRNOP00000016240 C2H2 ZF 169 190

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL012562 Aedes aegypti AAEL012562 N 0.000
AALB004151 Anopheles albimanus AALB004151 N 0.000
AARA005712 Anopheles arabiensis AARA005712 N 0.000
AATE001068 Anopheles atroparvus AATE001068 N 0.000
ACEP20954 Atta cephalotes ACEP20954 I 0.000
ACHR008870 Anopheles christyi ACHR008870 N 0.000
ACOM031194 Anopheles coluzzii ACOM031194 N 0.000
ACUA003634 Anopheles culicifacies ACUA003634 N 0.000
ADAC005680 Anopheles darlingi ADAC005680 N 0.000
ADIR007538 Anopheles dirus ADIR007538 N 0.000
AEPI008163 Anopheles epiroticus AEPI008163 N 0.000
AFAF004824 Anopheles farauti AFAF004824 N 0.000
AFUN011810 Anopheles funestus AFUN011810 N 0.000
AMEC012294 Anopheles melas AMEC012294 N 0.000
AMIN011013 Anopheles minimus AMIN011013 N 0.000
AQUA011172 Anopheles quadriannulatus AQUA011172 N 0.000
ASTEI06385 Anopheles stephensi ASTEI06385 N 0.000
CLK Anopheles gambiae AGAP005711 N 0.000
CPIJ002146 Culex quinquefasciatus CPIJ002146 N 0.000
CpipJ_CPIJ002146 Culex pipiens CpipJ_CPIJ002146 N 0.000
GB48028 Apis mellifera GB48028 I 0.000
GJ11427 Drosophila virilis FBgn0198685 I 0.000
HHAL003628-PA Halyomorpha halys HHAL003628-PA I 0.000
HMEL008784 Heliconius melpomene HMEL008784 I 0.000
Hsal_05831--XP_394233.3_APIME Harpegnathos saltator Hsal_05831--XP_394233.3_APIME I 0.000
ISCW007040 Ixodes scapularis ISCW007040 I 0.000
KGM_10878 Danaus plexippus KGM_10878 I 0.000
LCUP014936 Lucilia cuprina LCUP014936 I 0.000
LLOJ006614 Lutzomyia longipalpis LLOJ006614 I 0.000
MCINX000525 Melitaea cinxia MCINX000525 I 0.000
PPAI002844 Phlebotomus papatasi PPAI002844 I 0.000
RPRC002110 Rhodnius prolixus RPRC002110 I 0.000
TC000088 Tribolium castaneum TC000088 I 0.000
YQE_03736 Dendroctonus ponderosae YQE_03736 I 0.000