Znf740 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000012192 T108971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN

NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.827 1.000
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN

NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.827 1.000
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH

DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.827 1.000
ZNF740
M02891_2.00
Homo sapiens
VCCCCCCCMY

RKGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_1
0.807 0.956
ZNF740
M02892_2.00
Homo sapiens
VCCCCCCCAY

RTGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_2
0.807 0.956
ZNF740
M04467_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX
0.807 0.956
ZNF740
M04469_2.00
Homo sapiens
NYNCCCCCCCCAC

GTGGGGGGGGNRN
SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX
0.807 0.956
ZNF740
M10221_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF740_02
0.807 0.956
ZNF740
M04468_2.00
Homo sapiens
YYDCCCCCCCCAY

RTGGGGGGGGHRR
SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX
0.807 0.956
ZNF740
M04470_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX
0.807 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000016240 C2H2 ZF 113 135
ENSRNOP00000016240 C2H2 ZF 141 163
ENSRNOP00000016240 C2H2 ZF 169 190

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.000
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.000
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.000
Bra024310 Brassica rapa Bra024310 I 0.000
Bra020620 Brassica rapa Bra020620 I 0.000
Bra010010 Brassica rapa Bra010010 I 0.000
Bra007083 Brassica rapa Bra007083 I 0.000
Bra000102 Brassica rapa Bra000102 I 0.000
PK05128.1 Cannabis sativa PK05128.1 D 0.000
PK11472.1 Cannabis sativa PK11472.1 I 0.000
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.000
Ca_03753 Cicer arietinum Ca_03753 I 0.000
Cla015037 Citrullus lanatus Cla015037 I 0.000
Cla011478 Citrullus lanatus Cla011478 I 0.000
Cla020112 Citrullus lanatus Cla020112 I 0.000
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.000
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.000
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.000
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.000
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.000
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.000
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.000
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.000
Thhalv10004701m.g Eutrema salsugineum Thhalv10004701m.g I 0.000
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.000
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.000
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.000
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.000
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.000
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.000
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.000
Gorai.001G000600 Gossypium raimondii Gorai.001G000600 I 0.000
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.000
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.000
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.000
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.000
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.000
MDP0000270365 Malus domestica MDP0000270365 I 0.000
MDP0000176747 Malus domestica MDP0000176747 I 0.000
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.000
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.000
mgf009803m Mimulus guttatus mgf009803m I 0.000
mgf012838m Mimulus guttatus mgf012838m I 0.000
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.000
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.000
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.000
OBART02G11580 Oryza barthii OBART02G11580 I 0.000
OBART02G05680 Oryza barthii OBART02G05680 I 0.000
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.000
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.000
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.000
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.000
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.000
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.000
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.000
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.000
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.000
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.000
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.000
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.000
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.000
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.000
OS02G0175100 Oryza sativa OS02G0175100 I 0.000
OS02G0266800 Oryza sativa OS02G0266800 D 0.000
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.000
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.000
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I 0.000
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I 0.000
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.000
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.000
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.000
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.000
Pm020231 Prunus mume Pm020231 I 0.000
Pm003522 Prunus mume Pm003522 I 0.000
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.000
29598.m000468 Ricinus communis 29598.m000468 I 0.000
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.000
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.000
Si022331m.g Setaria italica Si022331m.g I 0.000
Si017778m.g Setaria italica Si017778m.g I 0.000
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.000
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I 0.000
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.000
Sb08g020600 Sorghum bicolor Sb08g020600 I 0.000
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.000
TCM_026349 Theobroma cacao TCM_026349 I 0.000
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.000
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.000