Mecom (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000012645 T108974_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mecom
M02667_2.00
Mus musculus
KNTTATCTTRTCTH

DAGAYAAGATAANM
SELEX
Mathelier et al.(2014)
MA0029.1
0.827 1.000
Mecom
M08980_2.00
Mus musculus
HNTNTTATCTTRTCWN

NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B
0.827 1.000
MECOM
M08862_2.00
Homo sapiens
HNTNTTATCTTRTCWN

NWGAYAAGATAANAND
Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B
0.822 0.982
MECOM
M10125_2.00
Homo sapiens
TTATCTTATCTTRTCW

WGAYAAGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_01
0.822 0.982
MECOM
M10126_2.00
Homo sapiens
TTATCTTRTCH

DGAYAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_02
0.822 0.982
MECOM
M10127_2.00
Homo sapiens
TTATCTTATCT

AGATAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_03
0.822 0.982
MECOM
M10128_2.00
Homo sapiens
TAWYYWDWYHTATYH

DRATADRAHWRRAWA
Transfac
Matys et al.(2006)
V$EVI1_04
0.822 0.982
MECOM
M10129_2.00
Homo sapiens
HTATCTTATCT

AGATAAGATAD
Transfac
Matys et al.(2006)
V$EVI1_05
0.822 0.982
MECOM
M10130_2.00
Homo sapiens
TTATCTTGT

ACAAGATAA
Transfac
Matys et al.(2006)
V$EVI1_06
0.822 0.982
MECOM
M10131_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI1_Q3
0.822 0.982
MECOM
M10132_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVI_Q6
0.822 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000060380 C2H2 ZF 21 42
ENSRNOP00000060380 C2H2 ZF 76 97
ENSRNOP00000060380 C2H2 ZF 103 125
ENSRNOP00000060380 C2H2 ZF 131 154
ENSRNOP00000060380 C2H2 ZF 160 182
ENSRNOP00000060380 C2H2 ZF 188 210
ENSRNOP00000060380 C2H2 ZF 217 238
ENSRNOP00000060380 C2H2 ZF 733 755
ENSRNOP00000060380 C2H2 ZF 761 784
ENSRNOP00000060380 C2H2 ZF 790 812

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action