Sall2 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000013287 T108979_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in eye development; negative regulation of transcription by RNA polymerase II; and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within neural tube development. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in coloboma. Orthologous to human SALL2 (spalt like transcription factor 2). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000017730 C2H2 ZF 372 394
ENSRNOP00000017730 C2H2 ZF 400 422
ENSRNOP00000017730 C2H2 ZF 657 679
ENSRNOP00000017730 C2H2 ZF 690 711
ENSRNOP00000017730 C2H2 ZF 909 930
ENSRNOP00000017730 C2H2 ZF 937 961
ENSRNOP00000073873 C2H2 ZF 370 392
ENSRNOP00000073873 C2H2 ZF 398 420
ENSRNOP00000073873 C2H2 ZF 655 677
ENSRNOP00000073873 C2H2 ZF 688 709
ENSRNOP00000073873 C2H2 ZF 907 928
ENSRNOP00000073873 C2H2 ZF 935 959

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSDORG00000006177 Dipodomys ordii ENSDORG00000006177 N 0.827
Sall2 Mus musculus ENSMUSG00000049532 N 0.827
ENSSHAG00000009219 Sarcophilus harrisii ENSSHAG00000009219 N 0.767
SALL2 Monodelphis domestica ENSMODG00000006068 N 0.767