Snai3 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000013586 T108983_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI3
M04607_2.00 		Homo sapiens
YRCACCTGYH
DRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX 		0.781 0.858
SNAI3
M04608_2.00 		Homo sapiens
YVCACCTGYH
DRCAGGTGBR		 SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX 		0.781 0.858
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000018387 C2H2 ZF 147 169
ENSRNOP00000018387 C2H2 ZF 178 200
ENSRNOP00000018387 C2H2 ZF 204 226
ENSRNOP00000018387 C2H2 ZF 232 254
ENSRNOP00000018387 C2H2 ZF 260 280

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

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17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action