Rreb1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000015701 T109020_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RREB1
M02665_2.00 		Homo sapiens
MCMCMAMMCAMCMMCHMMSV
BSKKDGKKGKTGKKTKGKGK		 SELEX
Mathelier et al.(2014)
MA0073.1 		0.823 0.989
RREB1
M10203_2.00 		Homo sapiens
MCCCAAMCMMMCMM
KKGKKKGKTTGGGK		 Transfac
Matys et al.(2006)
V$RREB1_01 		0.823 0.989
RREB1
M10204_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RREB1_Q5 		0.823 0.989
RREB1
M10205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RREB_Q5 		0.823 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000056967 C2H2 ZF 66 88
ENSRNOP00000056967 C2H2 ZF 97 119
ENSRNOP00000056967 C2H2 ZF 125 147
ENSRNOP00000056967 C2H2 ZF 643 665
ENSRNOP00000056967 C2H2 ZF 671 693
ENSRNOP00000056967 C2H2 ZF 699 722
ENSRNOP00000056967 C2H2 ZF 753 775
ENSRNOP00000056967 C2H2 ZF 790 813
ENSRNOP00000056967 C2H2 ZF 1517 1539
ENSRNOP00000056967 C2H2 ZF 1545 1567
ENSRNOP00000073072 C2H2 ZF 66 88
ENSRNOP00000073072 C2H2 ZF 97 119
ENSRNOP00000073072 C2H2 ZF 125 147
ENSRNOP00000073072 C2H2 ZF 643 665
ENSRNOP00000073072 C2H2 ZF 671 693
ENSRNOP00000073072 C2H2 ZF 699 722
ENSRNOP00000073072 C2H2 ZF 753 775
ENSRNOP00000073072 C2H2 ZF 790 813
ENSRNOP00000073072 C2H2 ZF 1248 1270
ENSRNOP00000073072 C2H2 ZF 1276 1299
ENSRNOP00000073072 C2H2 ZF 1571 1593
ENSRNOP00000073072 C2H2 ZF 1599 1621

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

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36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action