Bnc1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000019770 T109077_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity and rDNA binding activity. Predicted to be involved in positive regulation of oocyte maturation and positive regulation of transcription by RNA polymerase I. Predicted to act upstream of or within several processes, including positive regulation of epithelial cell proliferation; regulation of transcription by RNA polymerase II; and wound healing. Predicted to be located in cytoplasm; nucleolus; and nucleoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 16. Orthologous to human BNC1 (basonuclin 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Bnc1
M10340_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BNC1_01
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000062098 C2H2 ZF 355 377
ENSRNOP00000062098 C2H2 ZF 382 404

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action