CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp90
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000020087
T109079_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP90
M07672_2.00
Homo sapiens
CYTTAGCTGYRT
AYRCAGCTAARG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP90.RCADE.OriginalMapping
0.794
0.963
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000027209
C2H2 ZF
209
231
YKCDKCRKSFIHRSSLNKHEKIH
ENSRNOP00000027209
C2H2 ZF
251
273
HECTDCGKTFLWRTQLTEHQRIH
ENSRNOP00000027209
C2H2 ZF
279
301
FECNVCGKAFRHSSSLGQHENAH
ENSRNOP00000027209
C2H2 ZF
307
329
YQCSLCGKAFQRSSSLVQHQRIH
ENSRNOP00000027209
C2H2 ZF
335
357
YRCNLCGRSFRHSTSLTQHEVTH
ENSRNOP00000027209
C2H2 ZF
363
385
FQCKECGKAFSRCSSLVQHERTH
ENSRNOP00000027209
C2H2 ZF
391
413
FECSICGRAFGQSPSLYKHMRIH
ENSRNOP00000027209
C2H2 ZF
447
469
YHCIDCGKDFSHITDFTEHQRIH
ENSRNOP00000027209
C2H2 ZF
494
516
YQCNVCGKAFKRSTSFIEHHRIH
ENSRNOP00000027209
C2H2 ZF
522
544
YECNECGEAFSRLSSLTQHERTH
ENSRNOP00000027209
C2H2 ZF
550
572
YECIDCGKAFSQSSSLIQHERTH
ENSRNOP00000027209
C2H2 ZF
578
600
YECNECGRAFRKKTNLHDHQRIH
ENSRNOP00000027209
C2H2 ZF
606
628
YACKECGKNFSRSSALTKHHRIH
ENSRNOP00000075443
C2H2 ZF
157
179
YKCDKCRKSFIHRSSLNKHEKIH
ENSRNOP00000075443
C2H2 ZF
199
221
HECTDCGKTFLWRTQLTEHQRIH
ENSRNOP00000075443
C2H2 ZF
227
249
FECNVCGKAFRHSSSLGQHENAH
ENSRNOP00000075443
C2H2 ZF
255
277
YQCSLCGKAFQRSSSLVQHQRIH
ENSRNOP00000075443
C2H2 ZF
283
305
YRCNLCGRSFRHSTSLTQHEVTH
ENSRNOP00000075443
C2H2 ZF
311
333
FQCKECGKAFSRCSSLVQHERTH
ENSRNOP00000075443
C2H2 ZF
339
361
FECSICGRAFGQSPSLYKHMRIH
ENSRNOP00000075443
C2H2 ZF
395
417
YHCIDCGKDFSHITDFTEHQRIH
ENSRNOP00000075443
C2H2 ZF
442
464
YQCNVCGKAFKRSTSFIEHHRIH
ENSRNOP00000075443
C2H2 ZF
470
492
YECNECGEAFSRLSSLTQHERTH
ENSRNOP00000075443
C2H2 ZF
498
520
YECIDCGKAFSQSSSLIQHERTH
ENSRNOP00000075443
C2H2 ZF
526
548
YECNECGRAFRKKTNLHDHQRIH
ENSRNOP00000075443
C2H2 ZF
554
576
YACKECGKNFSRSSALTKHHRIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy