CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Prdm9
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000021493
T109088_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000060531
C2H2 ZF
521
540
RQCGQCFSDKSNVSEHQRTH
ENSRNOP00000060531
C2H2 ZF
546
568
YICRECGRGFSQKSDLIKHQRTH
ENSRNOP00000060531
C2H2 ZF
574
596
YICRECGRGFTQKSDLIKHQRTH
ENSRNOP00000060531
C2H2 ZF
602
624
YICRECGRGFTQKSDLIKHQRTH
ENSRNOP00000060531
C2H2 ZF
630
652
YICRECGRGFTQKSDLIKHQRTH
ENSRNOP00000060531
C2H2 ZF
658
680
YICRECGRGFTQKSSLIRHQRTH
ENSRNOP00000060531
C2H2 ZF
686
708
YICRECGLGFTQKSNLIRHLRTH
ENSRNOP00000060531
C2H2 ZF
714
736
YICRECGLGFTRKSNLIQHQRTH
ENSRNOP00000060531
C2H2 ZF
742
764
YICRECGQGLTWKSSLIQHQRTH
ENSRNOP00000060531
C2H2 ZF
770
792
YICRECGRGFTWKSSLIQHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
0 Related TFs
">No related TF found