Zfp541 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000021800 T109094_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable transcription corepressor activity. Predicted to be involved in histone deacetylation; negative regulation of transcription, DNA-templated; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of histone deacetylase complex and transcription regulator complex. Orthologous to human ZNF541 (zinc finger protein 541). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF541
M10185_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF541_02 		0.963 0.963
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000055040 C2H2 ZF 140 162
ENSRNOP00000055040 C2H2 ZF 168 190
ENSRNOP00000055040 C2H2 ZF 196 221
ENSRNOP00000055040 C2H2 ZF 837 859
ENSRNOP00000055040 C2H2 ZF 1239 1261

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp541 Mus musculus ENSMUSG00000078796 I 0.994
ZNF541 Pteropus vampyrus ENSPVAG00000004031 I 0.988
ZNF541 Myotis lucifugus ENSMLUG00000012684 I 0.981
Myotis_brandtii_ZNF541_10010046 Myotis brandtii Myotis_brandtii_ZNF541_10010046 I 0.981
ZNF541 Canis familiaris ENSCAFG00000004103 I 0.981
ZNF541 Otolemur garnettii ENSOGAG00000002397 I 0.969
ZNF541 Sus scrofa ENSSSCG00000003119 I 0.969
ENSPPYG00000010178 Pongo abelii ENSPPYG00000010178 I 0.969
ENSOARG00000011296 Ovis aries ENSOARG00000011296 I 0.969
ZNF541 Pan troglodytes ENSPTRG00000011212 I 0.963
ZNF541 Dasypus novemcinctus ENSDNOG00000049267 I 0.963
ENSP00000313258-D1 Bos grunniens ENSP00000313258-D1 I 0.963
ZNF541 Gorilla gorilla ENSGGOG00000000277 I 0.963
ZNF541 Homo sapiens ENSG00000118156 D 0.963
ENSMPUG00000004486 Mustela putorius furo ENSMPUG00000004486 I 0.963
ZNF541 Oryctolagus cuniculus ENSOCUG00000000969 I 0.963
ZNF541 Bos taurus ENSBTAG00000012606 I 0.963
ZNF541 Callithrix jacchus ENSCJAG00000011435 I 0.956
ENSSTOG00000026879 Ictidomys tridecemlineatus ENSSTOG00000026879 I 0.956
ZNF541 Procavia capensis ENSPCAG00000004786 I 0.944
ENSDORG00000009996 Dipodomys ordii ENSDORG00000009996 I 0.844
ENSLACG00000013135 Latimeria chalumnae ENSLACG00000013135 I 0.819
ZNF541 Anolis carolinensis ENSACAG00000013634 I 0.806
ENSPSIG00000006182 Pelodiscus sinensis ENSPSIG00000006182 I 0.713