Trerf1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000022598 T109102_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable several functions, including nuclear receptor coactivator activity; progesterone receptor binding activity; and transcription coactivator binding activity. Predicted to be involved in cellular response to steroid hormone stimulus; histone deacetylation; and regulation of transcription, DNA-templated. Predicted to be located in cytosol; fibrillar center; and nucleoplasm. Predicted to be part of histone deacetylase complex and transcription regulator complex. Predicted to be active in nucleus. Orthologous to human TRERF1 (transcriptional regulating factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000032697 C2H2 ZF 518 540
ENSRNOP00000032697 C2H2 ZF 935 959
ENSRNOP00000032697 C2H2 ZF 1008 1030
ENSRNOP00000072249 C2H2 ZF 518 540
ENSRNOP00000072249 C2H2 ZF 1044 1068
ENSRNOP00000072249 C2H2 ZF 1117 1139

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

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45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action