Znf454 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000022971 T109106_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.773 0.909
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.773 0.909
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.773 0.909
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.773 0.909
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.773 0.909
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.773 0.909
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.773 0.909
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000031832 C2H2 ZF 134 156
ENSRNOP00000031832 C2H2 ZF 173 195
ENSRNOP00000031832 C2H2 ZF 201 223
ENSRNOP00000031832 C2H2 ZF 229 251
ENSRNOP00000031832 C2H2 ZF 257 279
ENSRNOP00000031832 C2H2 ZF 285 307
ENSRNOP00000031832 C2H2 ZF 313 335
ENSRNOP00000031832 C2H2 ZF 341 363
ENSRNOP00000031832 C2H2 ZF 369 391
ENSRNOP00000031832 C2H2 ZF 397 419
ENSRNOP00000031832 C2H2 ZF 425 447
ENSRNOP00000031832 C2H2 ZF 453 475

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF454 Ochotona princeps ENSOPRG00000009035 I 0.775
ZNF454 Felis catus ENSFCAG00000021971 I 0.774
Zfp454 Mus musculus ENSMUSG00000048728 I 0.774
ZNF454 Erinaceus europaeus ENSEEUG00000007684 I 0.774
ENSNLEG00000001430 Nomascus leucogenys ENSNLEG00000001430 I 0.773
ENSOARG00000004411 Ovis aries ENSOARG00000004411 I 0.773
ZNF454 Pteropus vampyrus ENSPVAG00000007676 I 0.773
ZNF454 Pan troglodytes ENSPTRG00000017611 I 0.773
ZNF454 Bos taurus ENSBTAG00000004262 I 0.773
ENSBTAP00000016859-D1 Bos grunniens ENSBTAP00000016859-D1 I 0.773
ENSMPUG00000000725 Mustela putorius furo ENSMPUG00000000725 I 0.773
ENSCSAG00000008562 Chlorocebus sabaeus ENSCSAG00000008562 I 0.773
ZNF454 Equus caballus ENSECAG00000005115 I 0.773
ZNF454 Homo sapiens ENSG00000178187 D 0.773
ZNF454 Canis familiaris ENSCAFG00000031168 I 0.773
ZNF454 Gorilla gorilla ENSGGOG00000022508 I 0.773
ZNF454 Sus scrofa ENSSSCG00000027351 I 0.772
ZNF454 Callithrix jacchus ENSCJAG00000018857 I 0.772
ZNF454 Oryctolagus cuniculus ENSOCUG00000029119 I 0.771
ENSPANG00000009509 Papio anubis ENSPANG00000009509 I 0.770
ZNF454 Tursiops truncatus ENSTTRG00000012880 I 0.769
ZNF454 Choloepus hoffmanni ENSCHOG00000002770 I 0.767
ENSP00000326249 Macaca fascicularis ENSP00000326249 I 0.765
ENSMMUG00000008980 Macaca mulatta ENSMMUG00000008980 I 0.765
ZNF454 Myotis lucifugus ENSMLUG00000002894 I 0.763
ZNF454 Tupaia belangeri ENSTBEG00000000346 I 0.759