CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfat
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000025140
T109121_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000059224
C2H2 ZF
264
286
FTCEYCNKVFKFKHSLQAHLRIH
ENSRNOP00000059224
C2H2 ZF
292
314
YKCSQCSYASAIKANLNVHLRKH
ENSRNOP00000059224
C2H2 ZF
319
342
FACDYCSFTCLSKGHLKVHIERVH
ENSRNOP00000059224
C2H2 ZF
348
370
HCRFCKKKYSDVKNLIKHIRDMH
ENSRNOP00000059224
C2H2 ZF
397
419
YDCHICERKFKNELDRDRHMLVH
ENSRNOP00000059224
C2H2 ZF
451
474
YVCAICLKKFVSSIRLRSHIREVH
ENSRNOP00000059224
C2H2 ZF
729
751
LECEYCGKLFWYQVHFDMHVRTH
ENSRNOP00000059224
C2H2 ZF
785
809
LKCPTDGCDYSTPDKYKLQAHLKVH
ENSRNOP00000059224
C2H2 ZF
817
840
YSCPVCEKSFSEDRLIKSHIKTNH
ENSRNOP00000059224
C2H2 ZF
896
918
FKCSLCEYATRSKSNLKAHMNRH
ENSRNOP00000059224
C2H2 ZF
924
946
HLCDMCGKKFKSKGTLKSHKLLH
ENSRNOP00000059224
C2H2 ZF
953
975
FKCTVCDYTAAQKPQLLRHMEQH
ENSRNOP00000059224
C2H2 ZF
981
1004
FRCAHCHYSCNISGSLKRHYNRKH
ENSRNOP00000059224
C2H2 ZF
1028
1051
LKCPVCSFVYGTKWEFNRHLKNKH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZFAT
Equus caballus
ENSECAG00000024767
N
0.826
Zfat
Mus musculus
ENSMUSG00000022335
N
0.826
ZFAT
Oryctolagus cuniculus
ENSOCUG00000017015
N
0.826
ZFAT
Canis familiaris
ENSCAFG00000001159
N
0.825
ENSSTOG00000006903
Ictidomys tridecemlineatus
ENSSTOG00000006903
N
0.825
ENSNLEG00000010576
Nomascus leucogenys
ENSNLEG00000010576
N
0.824
ENSCSAG00000009828
Chlorocebus sabaeus
ENSCSAG00000009828
N
0.824
ENSPANG00000017457
Papio anubis
ENSPANG00000017457
N
0.824
ZFAT
Callithrix jacchus
ENSCJAG00000004348
N
0.823
ZFAT
Homo sapiens
ENSG00000066827
N
0.814
ENSMPUG00000001862
Mustela putorius furo
ENSMPUG00000001862
N
0.807
ZFAT
Pteropus vampyrus
ENSPVAG00000003836
N
0.802