CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ikzf5
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000025651
T109126_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be part of protein-containing complex. Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human IKZF5 (IKAROS family zinc finger 5). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ikzf5
M10347_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IKZF5_02
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000036563
C2H2 ZF
82
104
LKCRYCNYASKGTARLIEHIRIH
ENSRNOP00000036563
C2H2 ZF
110
132
HRCHLCPFASAYERHLEAHMRSH
ENSRNOP00000036563
C2H2 ZF
138
161
YKCELCSFRCSDRSNLSHHRRRKH
ENSRNOP00000071231
C2H2 ZF
82
104
LKCRYCNYASKGTARLIEHIRIH
ENSRNOP00000071231
C2H2 ZF
110
132
HRCHLCPFASAYERHLEAHMRSH
ENSRNOP00000071231
C2H2 ZF
138
161
YKCELCSFRCSDRSNLSHHRRRKH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy