CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zbtb45
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000027459
T109143_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Orthologous to human ZBTB45 (zinc finger and BTB domain containing 45). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB45
M04433_2.00
Homo sapiens
BMTATAGGBRN
NYVCCTATAKV
SELEX
Yin et al.(2017)
ZBTB45_eDBD_HT-SELEX
0.827
1.000
ZBTB45
M04434_2.00
Homo sapiens
BVTATASGBGN
NCVCSTATABV
SELEX
Yin et al.(2017)
ZBTB45_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000033852
C2H2 ZF
411
433
YECSHCRKTFSSRKNYTKHMFIH
ENSRNOP00000033852
C2H2 ZF
439
461
HQCAVCWRSFSLRDYLLKHMVTH
ENSRNOP00000033852
C2H2 ZF
467
489
FQCAVCAKRFTQKSSLNVHMRTH
ENSRNOP00000033852
C2H2 ZF
495
516
PCPACGKVFSHRALLERHLAAH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy