CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Mynn
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000027923
T109147_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYNN
M08283_2.00
Homo sapiens
GRCTYTTAWTTT
AAAWTAARAGYC
ChIP-seq
Schmitges et al.(2016)
Q9NPC7_1-4.RCADE
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000010344
C2H2 ZF
189
210
MCNTCGKVFSEASSLRRHMRIH
ENSRNOP00000010344
C2H2 ZF
216
238
YVCHLCGKAFTQCNQLKTHVRTH
ENSRNOP00000010344
C2H2 ZF
244
267
YKCELCDKGFAQKCQLVFHSRMHH
ENSRNOP00000010344
C2H2 ZF
273
295
YKCDVCNLQFATSSNLKIHARKH
ENSRNOP00000010344
C2H2 ZF
301
323
YVCDRCGQRFAQASTLTYHVRRH
ENSRNOP00000010344
C2H2 ZF
329
351
YVCDTCGKAFAVSSSLITHSRKH
ENSRNOP00000010344
C2H2 ZF
357
380
FICELCGNSYTDIKNLKKHKTKVH
ENSRNOP00000075326
C2H2 ZF
303
324
MCNTCGKVFSEASSLRRHMRIH
ENSRNOP00000075326
C2H2 ZF
330
352
YVCHLCGKAFTQCNQLKTHVRTH
ENSRNOP00000075326
C2H2 ZF
358
381
YKCELCDKGFAQKCQLVFHSRMHH
ENSRNOP00000075326
C2H2 ZF
387
409
YKCDVCNLQFATSSNLKIHARKH
ENSRNOP00000075326
C2H2 ZF
415
437
YVCDRCGQRFAQASTLTYHVRRH
ENSRNOP00000075326
C2H2 ZF
443
465
YVCDTCGKAFAVSSSLITHSRKH
ENSRNOP00000075326
C2H2 ZF
471
493
YICGICGKSFISSGELNKHFRSH
ENSRNOP00000075326
C2H2 ZF
499
522
FICELCGNSYTDIKNLKKHKTKVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy