CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Znf768
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000029490
T109165_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF768 (zinc finger protein 768). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF768
M08333_2.00
Homo sapiens
CTYRMCCTCTCTGDG
CHCAGAGAGGKYRAG
ChIP-seq
Schmitges et al.(2016)
Q9H5H4_1-5.RCADE
0.826
0.996
ZNF768
M08915_2.00
Homo sapiens
VCTYVMCCTCTCTGDGCYYB
VRRGCHCAGAGAGGKBRAGB
Misc
Kulakovskiy et al.(2013)
ZN768_HUMAN.H11MO.0.C
0.826
0.996
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000024639
C2H2 ZF
289
310
ICGICGKSFGRGSTLIQHQRIH
ENSRNOP00000024639
C2H2 ZF
316
338
YKCEVCSKAFSQSSDLIKHQRTH
ENSRNOP00000024639
C2H2 ZF
344
366
YKCPRCGKAFADSSYLLRHQRTH
ENSRNOP00000024639
C2H2 ZF
372
394
YKCPHCGKAFGDSSYLLRHQRTH
ENSRNOP00000024639
C2H2 ZF
400
422
YSCPECGKCYSQNSSLRSHQRVH
ENSRNOP00000024639
C2H2 ZF
428
450
FSCGICGKSFSQRSALIPHARSH
ENSRNOP00000024639
C2H2 ZF
456
478
FKCPECGKRFGQSSVLAIHARTH
ENSRNOP00000024639
C2H2 ZF
484
506
YSCPDCGKTFNRSSTLIQHQRSH
ENSRNOP00000024639
C2H2 ZF
512
534
YRCAVCGKGFCRSSTLLQHHRVH
ENSRNOP00000024639
C2H2 ZF
540
562
YKCDDCGKAFSQSSDLIRHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy