Znf354b (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000029678 T109166_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF354B (zinc finger protein 354B). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF354B
M07653_2.00 		Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData 		0.776 0.943
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000004902 C2H2 ZF 145 167
ENSRNOP00000004902 C2H2 ZF 173 195
ENSRNOP00000004902 C2H2 ZF 201 223
ENSRNOP00000004902 C2H2 ZF 229 251
ENSRNOP00000004902 C2H2 ZF 282 304
ENSRNOP00000004902 C2H2 ZF 310 332
ENSRNOP00000004902 C2H2 ZF 338 360
ENSRNOP00000004902 C2H2 ZF 366 388
ENSRNOP00000004902 C2H2 ZF 394 416
ENSRNOP00000004902 C2H2 ZF 422 444
ENSRNOP00000004902 C2H2 ZF 450 472
ENSRNOP00000004902 C2H2 ZF 478 500
ENSRNOP00000004902 C2H2 ZF 506 528

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

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26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action