CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp879
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000030517
T109177_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF879
M07766_2.00
Homo sapiens
DRBTNYRDTRTTDRGTSCATDTATRTTYAN
AWAAHAAWWNTRAAYATAHATGSACYHAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF879.RCADE.OriginalMapping
0.781
0.936
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000036773
C2H2 ZF
196
218
YKCNICGKGFLHSSSLSKHQRIH
ENSRNOP00000036773
C2H2 ZF
224
246
YQCKECRKAFSQSSSLTQHLRVH
ENSRNOP00000036773
C2H2 ZF
252
274
YVCSECGKAFSFTTSLIGHQRMH
ENSRNOP00000036773
C2H2 ZF
280
302
YRCKECGKTFKGSSSLNNHQRIH
ENSRNOP00000036773
C2H2 ZF
308
330
YTCSVCGRAFSQCSSLIQHQRIH
ENSRNOP00000036773
C2H2 ZF
336
358
YECSQCGKAFTSISRLSRHHRIH
ENSRNOP00000036773
C2H2 ZF
364
386
FHCNVCGKVFSYHSALIIHQRIH
ENSRNOP00000036773
C2H2 ZF
392
414
YACKECGKAFSQSSALIQHQRIH
ENSRNOP00000036773
C2H2 ZF
420
442
YKCDECGKAFSWISRLNIHHRIH
ENSRNOP00000036773
C2H2 ZF
448
470
YHCKECGKAFSSHSAVNTHRKIH
ENSRNOP00000036773
C2H2 ZF
476
498
YKCSDCEKAFNQSSALIQHQRIH
ENSRNOP00000036773
C2H2 ZF
504
526
FNCKVCGKAFRQSSSLMTHTRIH
ENSRNOP00000036773
C2H2 ZF
532
554
YKCKTCGKAFSQSSSLANHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy