Zfp879 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000030517 T109177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF879
M07766_2.00
Homo sapiens
DRBTNYRDTRTTDRGTSCATDTATRTTYAN

AWAAHAAWWNTRAAYATAHATGSACYHAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF879.RCADE.OriginalMapping
0.781 0.936
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000036773 C2H2 ZF 196 218
ENSRNOP00000036773 C2H2 ZF 224 246
ENSRNOP00000036773 C2H2 ZF 252 274
ENSRNOP00000036773 C2H2 ZF 280 302
ENSRNOP00000036773 C2H2 ZF 308 330
ENSRNOP00000036773 C2H2 ZF 336 358
ENSRNOP00000036773 C2H2 ZF 364 386
ENSRNOP00000036773 C2H2 ZF 392 414
ENSRNOP00000036773 C2H2 ZF 420 442
ENSRNOP00000036773 C2H2 ZF 448 470
ENSRNOP00000036773 C2H2 ZF 476 498
ENSRNOP00000036773 C2H2 ZF 504 526
ENSRNOP00000036773 C2H2 ZF 532 554

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action