CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp105
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000032919
T109197_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp105
M00148_2.00
Mus musculus
TTNTTKDNNN
NNNHMAANAA
PBM
Badis et al.(2009)
Zfp105_2634
0.820
0.976
ZNF35
M08334_2.00
Homo sapiens
BTTNTTKDYYHNHNDNDDCTYTTTDYWTNH
DNAWRHAAARAGHHNHNDNDRRHMAANAAV
ChIP-seq
Schmitges et al.(2016)
P13682_1-10.RCADE
0.819
0.980
ZNF35
M08250_2.00
Homo sapiens
TTVTARRARCTCTTTAYATAT
ATATRTAAAGAGYTYYTABAA
ChIP-seq
Najafabadi et al.(2015b)
ZNF35
0.819
0.980
ZNF35
M10257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF35_04
0.819
0.980
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000042236
C2H2 ZF
219
241
FTCSECGKGFSQSANLVVHQRIH
ENSRNOP00000042236
C2H2 ZF
247
269
FECHECGKAFIQSANLVVHQRIH
ENSRNOP00000042236
C2H2 ZF
275
297
YVCGKCGKAFTQSSNLTVHQKIH
ENSRNOP00000042236
C2H2 ZF
303
325
FKCGECEKAFSYSSQLARHQKVH
ENSRNOP00000042236
C2H2 ZF
331
353
YECNECGKTFTRSSNLIVHQRIH
ENSRNOP00000042236
C2H2 ZF
359
381
FACNDCGKAFTQSANLIVHQRSH
ENSRNOP00000042236
C2H2 ZF
387
409
YECKECGKAFSCFSHLIVHQRIH
ENSRNOP00000042236
C2H2 ZF
415
437
YDCSECGKAFSQLSCLIVHQRIH
ENSRNOP00000042236
C2H2 ZF
443
465
YVCNECGKAFTCSSYLLIHQRIH
ENSRNOP00000042236
C2H2 ZF
471
493
YSCNECGKAFRQRSSLTVHQRTH
ENSRNOP00000042236
C2H2 ZF
499
521
YECAKCGAAFISNSHLMRHHRTH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy