CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Klf16
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000033694
T109208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Klf16
M10346_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB4_02
0.827
1.000
KLF16
M02888_2.00
Homo sapiens
VMCMCDCCCMC
GKGGGHGKGKB
SELEX
Jolma et al.(2013)
KLF16_1
0.794
0.942
KLF16
M04457_2.00
Homo sapiens
VMCMCRCCCH
DGGGYGKGKB
SELEX
Yin et al.(2017)
KLF16_eDBD_HT-SELEX
0.794
0.942
KLF16
M04458_2.00
Homo sapiens
RMCACGCCCH
DGGGCGTGKY
SELEX
Yin et al.(2017)
KLF16_eDBD_Methyl-HT-SELEX
0.794
0.942
KLF14
M02930_2.00
Homo sapiens
DRHCACGCCCMYYH
DRRKGGGCGTGDYH
SELEX
Jolma et al.(2013)
KLF14_1
0.775
0.841
KLF14
M04657_2.00
Homo sapiens
NRMCMCGCCCMYN
NRKGGGCGKGKYN
SELEX
Yin et al.(2017)
KLF14_eDBD_HT-SELEX
0.775
0.841
KLF14
M08398_2.00
Homo sapiens
RGYCMCGCCCMCYN
NRGKGGGCGKGRCY
ChIP-seq
Schmitges et al.(2016)
Q8TD94.MEME
0.775
0.841
KLF14
M04658_2.00
Homo sapiens
NRMCVCRCCCMYN
NRKGGGYGBGKYN
SELEX
Yin et al.(2017)
KLF14_eDBD_Methyl-HT-SELEX
0.775
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000051080
C2H2 ZF
126
150
HRCPFPGCAKAYYKSSHLKSHLRTH
ENSRNOP00000051080
C2H2 ZF
156
180
FACDWPGCDKKFARSDELARHHRTH
ENSRNOP00000051080
C2H2 ZF
186
208
FPCPLCTKRFTRSDHLTKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy