CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp939
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000037366
T109217_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000029112
C2H2 ZF
184
206
YKCLECGKYFYYKSQIIEHQRSH
ENSRNOP00000029112
C2H2 ZF
212
234
YECTECGKSFSYKSHLTVHHRSH
ENSRNOP00000029112
C2H2 ZF
240
262
HECTECRKVFYYKSQLTRHQRSH
ENSRNOP00000029112
C2H2 ZF
268
290
YECMECGKSFYCNTHLTLHQRIH
ENSRNOP00000029112
C2H2 ZF
296
318
YACTECGKTFSFSACLTRHQRIH
ENSRNOP00000029112
C2H2 ZF
324
346
YECTHCPKAFYFKKQLTHHEKTH
ENSRNOP00000029112
C2H2 ZF
352
374
FECKQCGKAFYWRANLTVHQKTH
ENSRNOP00000029112
C2H2 ZF
380
402
FECKQCGKAFYCKSHLTVHQRTH
ENSRNOP00000029112
C2H2 ZF
408
430
YQCSQCRKAFYSQAQLVVHQRIH
ENSRNOP00000029112
C2H2 ZF
436
458
YECKQCGKTFYSKSGLTAHQKTH
ENSRNOP00000029112
C2H2 ZF
464
486
YACKECGKAFYNKYLLIEHHRVH
ENSRNOP00000029112
C2H2 ZF
492
514
YQCTECPKAFYCKKYLSLHQKTH
ENSRNOP00000029112
C2H2 ZF
520
542
FYCAECGKAFSWMSHLTQHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC120712.2
Rattus norvegicus
ENSRNOG00000059938
N
0.827