Zfp420 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000037556 T109220_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000034962 C2H2 ZF 29 51
ENSRNOP00000034962 C2H2 ZF 57 79
ENSRNOP00000034962 C2H2 ZF 85 107
ENSRNOP00000034962 C2H2 ZF 113 135
ENSRNOP00000034962 C2H2 ZF 141 163
ENSRNOP00000034962 C2H2 ZF 169 191
ENSRNOP00000034962 C2H2 ZF 197 219
ENSRNOP00000034962 C2H2 ZF 225 247
ENSRNOP00000034962 C2H2 ZF 253 275
ENSRNOP00000034962 C2H2 ZF 281 303
ENSRNOP00000034962 C2H2 ZF 309 331
ENSRNOP00000034962 C2H2 ZF 337 359
ENSRNOP00000034962 C2H2 ZF 365 387
ENSRNOP00000034962 C2H2 ZF 393 415
ENSRNOP00000034962 C2H2 ZF 421 443
ENSRNOP00000034962 C2H2 ZF 449 471
ENSRNOP00000034962 C2H2 ZF 477 499
ENSRNOP00000034962 C2H2 ZF 505 527
ENSRNOP00000034962 C2H2 ZF 533 555

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29801.m003096 Ricinus communis 29801.m003096 I 0.000
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.000
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.000
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.000
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.000
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.000
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.000
Cla022889 Citrullus lanatus Cla022889 I 0.000
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.000
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.000
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.000
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.000
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.000
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.000
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.000
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.000
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.000
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.000
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.000
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.000
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.000
mgf025567m Mimulus guttatus mgf025567m I 0.000
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.000
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.000
OB09G10200 Oryza brachyantha OB09G10200 I 0.000
OBART09G00310 Oryza barthii OBART09G00310 I 0.000
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.000
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.000
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.000
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.000
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.000
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.000
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.000
OS09G0106700 Oryza sativa OS09G0106700 I 0.000
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.000
PK29071.1 Cannabis sativa PK29071.1 I 0.000
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.000
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.000
Si032789m.g Setaria italica Si032789m.g I 0.000
TCM_007138 Theobroma cacao TCM_007138 I 0.000
TCM_033907 Theobroma cacao TCM_033907 I 0.000
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.000
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.000
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.000
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.000