CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC100910807
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000046156
T109252_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb33
M09005_2.00
Mus musculus
NTCTCGCGRKVBYNS
SNRVBMYCGCGAGAN
Misc
Kulakovskiy et al.(2013)
KAISO_MOUSE.H11MO.0.B
0.821
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000066134
C2H2 ZF
519
541
YQCRYCDKVFPLAEYRTKHEIHH
ENSRNOP00000066134
C2H2 ZF
547
570
YQCLACGKSFINYQFMSSHIKSVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy