CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp566
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000048138
T109279_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF566
M07677_2.00
Homo sapiens
BBCNGSYTCCYKTBCMGCNNB
VNNGCKGVAMRGGARSCNGVV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF566.RCADE.OriginalMapping
0.792
0.969
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000064228
C2H2 ZF
167
189
YECKDCGKTFRHPSGLTHHHKIH
ENSRNOP00000064228
C2H2 ZF
195
217
FECKECGKTFICGSDLTRHHRIH
ENSRNOP00000064228
C2H2 ZF
223
245
YECKDCGKAFSSGSNFTRHQRIH
ENSRNOP00000064228
C2H2 ZF
251
273
YECKECGKAFSSGSNFTQHQRIH
ENSRNOP00000064228
C2H2 ZF
279
301
YECKECGNAFSQSSQLIKHQRIH
ENSRNOP00000064228
C2H2 ZF
307
329
YECKECEKAFRSGSDLTRHQRIH
ENSRNOP00000064228
C2H2 ZF
335
357
YECKICGKAYSQSSQLISHHRIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy