Zfp647 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000050661 T109303_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.816 0.980
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.816 0.980
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.816 0.980
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.816 0.980
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.816 0.973
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000067546 C2H2 ZF 173 195
ENSRNOP00000067546 C2H2 ZF 201 223
ENSRNOP00000067546 C2H2 ZF 229 251
ENSRNOP00000067546 C2H2 ZF 257 279
ENSRNOP00000067546 C2H2 ZF 285 307
ENSRNOP00000067546 C2H2 ZF 315 335
ENSRNOP00000067546 C2H2 ZF 341 363
ENSRNOP00000067546 C2H2 ZF 369 391
ENSRNOP00000067546 C2H2 ZF 397 419
ENSRNOP00000067546 C2H2 ZF 425 447
ENSRNOP00000067546 C2H2 ZF 453 475
ENSRNOP00000067546 C2H2 ZF 481 503
ENSRNOP00000067546 C2H2 ZF 509 531

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.827
Zfp647 Mus musculus ENSMUSG00000054967 I 0.827
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.820
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.818
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.817
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.816
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.816
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.816
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.816
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.816
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.816
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.816
ZNF250 Homo sapiens ENSG00000196150 D 0.816
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.816
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.815
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.811
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.806
ZNF250 Sorex araneus ENSSARG00000004999 I 0.804
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.804
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.801
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.799
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.799
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.796
ZNF250 Felis catus ENSFCAG00000013730 I 0.796
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.795
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.795
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.795
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.795
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.781
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.774
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.765