CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC108348145
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000050695
T109304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF7
M07598_2.00
Homo sapiens
VWRRMADYWNYAARWGBWGRC
GYCWVCWYTTRNWRHTKYYWB
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF7.RCADE.ReprocessedData
0.791
0.929
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000048755
C2H2 ZF
240
262
YGCEECGKVFRLCSQLNQHQRIH
ENSRNOP00000048755
C2H2 ZF
268
290
FKCVDCGKGFRLSSKLIQHQRIH
ENSRNOP00000048755
C2H2 ZF
296
318
YRCEECGKTFGQSSSLIHHQRIH
ENSRNOP00000048755
C2H2 ZF
324
346
YSCQECGKSFSQQSQLVRHQRTH
ENSRNOP00000048755
C2H2 ZF
352
374
YPCQECGKAFSQSSTLAQHQRMH
ENSRNOP00000048755
C2H2 ZF
403
425
FKCEECGKAFRWISRLNQHQLIH
ENSRNOP00000048755
C2H2 ZF
431
453
YKCNKCTKAFGCSSRLIRHQRTH
ENSRNOP00000048755
C2H2 ZF
459
481
FKCEECGKGFVQGSHLIQHQRIH
ENSRNOP00000048755
C2H2 ZF
487
509
YVCDDCGKAFSQSSSLIYHQRIH
ENSRNOP00000048755
C2H2 ZF
515
537
YECIQCGKAFSMSTQLTSHQRIH
ENSRNOP00000048755
C2H2 ZF
543
565
YKCSECGKAFSQNSTLFQHQIIH
ENSRNOP00000048755
C2H2 ZF
571
593
YECSECGKAFSRSSYLIEHQRIH
ENSRNOP00000048755
C2H2 ZF
624
646
HQCDDCDKIFRWRSHLVIHQRIH
ENSRNOP00000048755
C2H2 ZF
652
674
YRCNACGKAFNRSSRLTQHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy