CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hic2
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000051458
T109308_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.827
1.000
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.795
0.852
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.795
0.852
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.795
0.852
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.795
0.852
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000072722
C2H2 ZF
448
470
YVCIPCAKGFPSSEQLNAHVETH
ENSRNOP00000072722
C2H2 ZF
512
534
FKCSVCEKTYKDPATLRQHEKTH
ENSRNOP00000072722
C2H2 ZF
540
562
FPCNICGKMFTQRGTMTRHMRSH
ENSRNOP00000072722
C2H2 ZF
568
590
FACDECGMRFTRQYRLTEHMRVH
ENSRNOP00000072722
C2H2 ZF
596
618
YECQLCGGKFTQQRNLISHLRMH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_05266
Capronia coronata
A1O1_05266
I
0.000
A1O3_09501
Capronia epimyces
A1O3_09501
I
0.000
A1O5_02494
Cladophialophora psammophila
A1O5_02494
I
0.000
A1O7_07477
Cladophialophora yegresii
A1O7_07477
I
0.000
A1O9_04866
Exophiala aquamarina
A1O9_04866
I
0.000
AB03300.1
Alternaria brassicicola
AB03300.1
I
0.000
ACRE_010130
Acremonium chrysogenum
ACRE_010130
I
0.000
AOL_s00007g157
Arthrobotrys oligospora
AOL_s00007g157
I
0.000
ARB_04419
Arthroderma benhamiae
ARB_04419
I
0.000
AUEXF2481DRAFT_26138
Aureobasidium subglaciale
AUEXF2481DRAFT_26138
I
0.000
BAUCODRAFT_35270
Baudoinia compniacensis
BAUCODRAFT_35270
I
0.000
BBA_01203
Beauveria bassiana
BBA_01203
I
0.000
Bcin06g05800
Botrytis cinerea
Bcin06g05800
I
0.000
BDDG_02017
Blastomyces dermatitidis
BDDG_02017
I
0.000
BGHDH14_bgh02169
Blumeria graminis
BGHDH14_bgh02169
I
0.000
ACLA_073870
Aspergillus clavatus
CADACLAG00006671
I
0.000
CADAFLAG00007610
Aspergillus flavus
CADAFLAG00007610
I
0.000
AFUA_2G13770
Aspergillus fumigatus
CADAFUAG00004253
I
0.000
CADANGAG00002059
Aspergillus niger
CADANGAG00002059
I
0.000
flbC
Aspergillus nidulans
CADANIAG00009129
I
0.000
CADAORAG00008269
Aspergillus oryzae
CADAORAG00008269
I
0.000
ATEG_01363
Aspergillus terreus
CADATEAG00002656
I
0.000
NFIA_088950
Neosartorya fischeri
CADNFIAG00008157
I
0.000
CCM_02232
Cordyceps militaris
CCM_02232
I
0.000
CFIO01_12494
Colletotrichum fioriniae
CFIO01_12494
I
0.000
CGGC5_122
Colletotrichum gloeosporioides
CGGC5_122
I
0.000
CHGG_05964
Chaetomium globosum
CHGG_05964
I
0.000
CIMG_04642
Coccidioides immitis
CIMG_04642
I
0.000
Cob_03489
Colletotrichum orbiculare
Cob_03489
I
0.000
COCC4DRAFT_131484
Bipolaris maydis
COCC4DRAFT_131484
I
0.000
COCCADRAFT_98899
Bipolaris zeicola
COCCADRAFT_98899
I
0.000
COCMIDRAFT_21646
Bipolaris oryzae
COCMIDRAFT_21646
I
0.000
COCSADRAFT_161582
Bipolaris sorokiniana
COCSADRAFT_161582
I
0.000
COCVIDRAFT_13178
Bipolaris victoriae
COCVIDRAFT_13178
I
0.000
CPC735_071670
Coccidioides posadasii
CPC735_071670
I
0.000
CPUR_08418
Claviceps purpurea
CPUR_08418
I
0.000
CSUB01_01878
Colletotrichum sublineola
CSUB01_01878
I
0.000
CTHT_0003500
Chaetomium thermophilum
CTHT_0003500
I
0.000
DOTSEDRAFT_71851
Dothistroma septosporum
DOTSEDRAFT_71851
I
0.000
DRE_00990
Drechslerella stenobrocha
DRE_00990
I
0.000
EPUS_00388
Endocarpon pusillum
EPUS_00388
I
0.000
estExt_fgenesh1_pm.C_chr_50368
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50368
I
0.000
estExt_fgeneshPB_pg.C_130275
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_130275
I
0.000
estExt_Genewise1Plus.C_70038
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_70038
I
0.000
EURHEDRAFT_401307
Aspergillus ruber
EURHEDRAFT_401307
I
0.000
EV44_g0721
Erysiphe necator
EV44_g0721
I
0.000
e_gw1.4.1259.1
Neurospora discreta
e_gw1.4.1259.1
I
0.000
e_gw1.5.1053.1
Cryphonectria parasitica
e_gw1.5.1053.1
I
0.000
F503_06777
Ophiostoma piceae uamh
F503_06777
I
0.000
FFUJ_02801
Fusarium fujikuroi
FFUJ_02801
I
0.000
fgenesh1_pg.00866_#_152
Aspergillus carbonarius
fgenesh1_pg.00866_#_152
I
0.000
fgenesh1_pg.C_scaffold_3000123
Cochliobolus heterostrophus C5
fgenesh1_pg.C_scaffold_3000123
I
0.000
fgenesh1_pg.sca_3_chr4_2_0000362
Nectria haematococca
fgenesh1_pg.sca_3_chr4_2_0000362
I
0.000
FGRRES_16768_M
Fusarium graminearum
FGRRES_16768_M
I
0.000
FOXG_01756
Fusarium oxysporum
FOXG_01756
I
0.000
FPSE_02736
Fusarium pseudograminearum
FPSE_02736
I
0.000
FVEG_08125
Fusarium verticillioides
FVEG_08125
I
0.000
G647_02610
Cladophialophora carrionii
G647_02610
I
0.000
GGTG_01964
Gaeumannomyces graminis
GGTG_01964
I
0.000
GLOINDRAFT_335196
Rhizophagus irregularis
GLOINDRAFT_335196
I
0.000
GLOINDRAFT_349090
Rhizophagus irregularis
GLOINDRAFT_349090
I
0.000
GLRG_10389
Colletotrichum graminicola
GLRG_10389
I
0.000
GMDG_05989
Pseudogymnoascus destructans
GMDG_05989
I
0.000
GSTUM_00008750001
Tuber melanosporum
GSTUM_00008750001
I
0.000
H072_861
Dactylellina haptotyla
H072_861
I
0.000
H101_07895
Trichophyton interdigitale
H101_07895
I
0.000
H102_02530
Trichophyton rubrum
H102_02530
I
0.000
H105_02549
Trichophyton soudanense
H105_02549
I
0.000
HCBG_00554
Histoplasma capsulatum
HCBG_00554
I
0.000
HMPREF1120_02106
Exophiala dermatitidis
HMPREF1120_02106
I
0.000
HMPREF1541_07984
Cyphellophora europaea
HMPREF1541_07984
I
0.000
HMPREF1624_07632
Sporothrix schenckii
HMPREF1624_07632
I
0.000
LEMA_P027150.1
Leptosphaeria maculans
LEMA_P027150.1
I
0.000
M437DRAFT_42614
Aureobasidium melanogenum
M437DRAFT_42614
I
0.000
M438DRAFT_322812
Aureobasidium pullulans
M438DRAFT_322812
I
0.000
MAJ_00908
Metarhizium majus
MAJ_00908
I
0.000
MAM_05760
Metarhizium album
MAM_05760
I
0.000
MANI_001811
Metarhizium anisopliae
MANI_001811
I
0.000
MBM_01420
Marssonina brunnea
MBM_01420
I
0.000
MBR_03199
Metarhizium brunneum
MBR_03199
I
0.000
MCYG_05824
Microsporum canis
MCYG_05824
I
0.000
MCYG_05824
Arthroderma otae
MCYG_05824
I
0.000
MGG_04699
Magnaporthe oryzae
MGG_04699
I
0.000
MGU_02996
Metarhizium guizhouense
MGU_02996
I
0.000
MYCFIDRAFT_100847
Pseudocercospora fijiensis
MYCFIDRAFT_100847
I
0.000
Mycgr3G100355
Zymoseptoria tritici
Mycgr3G100355
I
0.000
MYCTH_2297038
Myceliophthora thermophila
MYCTH_2297038
I
0.000
NCU03043
Neurospora crassa
NCU03043
D
0.000
NechaG78961
Fusarium solani
NechaG78961
I
0.000
NEUTE1DRAFT_115267
Neurospora tetrasperma
NEUTE1DRAFT_115267
I
0.000
OCS_01129
Ophiocordyceps sinensis
OCS_01129
I
0.000
OIDMADRAFT_115912
Oidiodendron maius
OIDMADRAFT_115912
I
0.000
PABG_06296
Paracoccidioides brasiliensis
PABG_06296
I
0.000
Pc12g12190
Penicillium chrysogenum
Pc12g12190
I
0.000
PCH_Pc12g12190
Penicillium rubens
PCH_Pc12g12190
I
0.000
PDE_08372
Penicillium oxalicum
PDE_08372
I
0.000
PDIP_78880
Penicillium digitatum
PDIP_78880
I
0.000
PEX1_042450
Penicillium expansum
PEX1_042450
I
0.000
PFICI_02017
Pestalotiopsis fici
PFICI_02017
I
0.000
PITC_054990
Penicillium italicum
PITC_054990
I
0.000
PMAA_052400
Talaromyces marneffei
PMAA_052400
I
0.000
PMAA_052400
Penicillium marneffei
PMAA_052400
I
0.000
PODANS_1_17760
Podospora anserina
PODANS_1_17760
I
0.000
PTRG_07594
Pyrenophora triticirepentis
PTRG_07594
I
0.000
PTT_10534
Pyrenophora teres
PTT_10534
I
0.000
PV04_07940
Capronia semiimmersa
PV04_07940
I
0.000
PV05_05275
Exophiala xenobiotica
PV05_05275
I
0.000
PV06_00709
Exophiala oligosperma
PV06_00709
I
0.000
PV07_11454
Cladophialophora immunda
PV07_11454
I
0.000
PV08_00761
Exophiala spinifera
PV08_00761
I
0.000
PV09_04811
Verruconis gallopava
PV09_04811
I
0.000
PV10_07579
Exophiala mesophila
PV10_07579
I
0.000
PV11_01462
Exophiala sideris
PV11_01462
I
0.000
PVAR5_4797
Byssochlamys spectabilis
PVAR5_4797
I
0.000
S40285_00731
Stachybotrys chlorohalonata
S40285_00731
I
0.000
S40288_04558
Stachybotrys chartarum
S40288_04558
I
0.000
SAPIO_CDS3239
Scedosporium apiospermum
SAPIO_CDS3239
I
0.000
SBOR_0041
Sclerotinia borealis
SBOR_0041
I
0.000
SEPMUDRAFT_127503
Sphaerulina musiva
SEPMUDRAFT_127503
I
0.000
SETTUDRAFT_28406
Setosphaeria turcica
SETTUDRAFT_28406
I
0.000
SMAC_00425
Sordaria macrospora
SMAC_00425
I
0.000
SNOG_04235
Stagonospora nodorum
SNOG_04235
I
0.000
SNOG_04235
Phaeosphaeria nodorum
SNOG_04235
I
0.000
SPBR_07023
Sporothrix brasiliensis
SPBR_07023
I
0.000
SS1G_02974
Sclerotinia sclerotiorum
SS1G_02974
I
0.000
TEQG_06780
Trichophyton equinum
TEQG_06780
I
0.000
TESG_06990
Trichophyton tonsurans
TESG_06990
I
0.000
THITE_2112492
Thielavia terrestris
THITE_2112492
I
0.000
TRIATDRAFT_168775
Trichoderma atroviride
TRIATDRAFT_168775
I
0.000
TRIREDRAFT_58011
Trichoderma reesei
TRIREDRAFT_58011
I
0.000
TRIVIDRAFT_56218
Trichoderma virens
TRIVIDRAFT_56218
I
0.000
TRV_08160
Trichophyton verrucosum
TRV_08160
I
0.000
TSTA_020500
Talaromyces stipitatus
TSTA_020500
I
0.000
U727_00430680621
Penicillium solitum
U727_00430680621
I
0.000
UCRNP2_1822
Neofusicoccum parvum
UCRNP2_1822
I
0.000
UREG_01842
Uncinocarpus reesii
UREG_01842
I
0.000
V499_00218
Pseudogymnoascus pannorum
V499_00218
I
0.000
VDBG_04717
Verticillium alfalfae
VDBG_04717
I
0.000
VDBG_04717
Verticillium albo atrum
VDBG_04717
I
0.000
W97_03394
Coniosporium apollinis
W97_03394
I
0.000
X797_004183
Metarhizium robertsii
X797_004183
I
0.000
YALI0_B00660g
Yarrowia lipolytica
YALI0_B00660g
I
0.000
Z517_02813
Fonsecaea pedrosoi
Z517_02813
I
0.000
Z518_09484
Rhinocladiella mackenziei
Z518_09484
I
0.000
Z519_07027
Cladophialophora bantiana
Z519_07027
I
0.000