CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC102547241
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000052023
T109319_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP82
M05853_2.00
Homo sapiens
CYNYHYNYARCYNYDTYN
NRAHRNRGYTRNRDRNRG
SMiLE-seq
Isakova et al.(2017)
ZFP82
0.781
0.953
ZFP82
M08356_2.00
Homo sapiens
AGAATTAGTRAAYTGGAARAY
RTYTTCCARTTYACTAATTCT
ChIP-seq
Schmitges et al.(2016)
Q8N141_6-12.RCADE
0.781
0.953
ZFP82
M08930_2.00
Homo sapiens
TTCCADTYBAYKRWDWYTYYHTTY
RAADRRARWHWYMRTVRAHTGGAA
Misc
Kulakovskiy et al.(2013)
ZFP82_HUMAN.H11MO.0.C
0.781
0.953
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000075093
C2H2 ZF
158
180
YECDACGKAFRVRQQLTFHHRIH
ENSRNOP00000075093
C2H2 ZF
186
208
YECKECGMAFRQTAHLTRHQRLH
ENSRNOP00000075093
C2H2 ZF
214
236
YECKECGQAFIYGPDLRAHQKLH
ENSRNOP00000075093
C2H2 ZF
242
264
YACKECGKAFRVRGQLTLHQRIH
ENSRNOP00000075093
C2H2 ZF
270
291
YVCKECGKAFRQYAHLTRHQKL
ENSRNOP00000075093
C2H2 ZF
326
348
YECKDCGKAFRVRQQLTLHQRIH
ENSRNOP00000075093
C2H2 ZF
354
376
YECNECGKTFSRGYHLILHHRIH
ENSRNOP00000075093
C2H2 ZF
382
404
YECKECWKAFSRYSQLISHQSIH
ENSRNOP00000075093
C2H2 ZF
410
432
YDCKECGKAFRLLSQLTQHQSIH
ENSRNOP00000075093
C2H2 ZF
438
460
YTCKECGKSFRLRQKLTLHQSIH
ENSRNOP00000075093
C2H2 ZF
466
488
FECKECRKAFRLNSSLIQHLRIH
ENSRNOP00000075093
C2H2 ZF
494
516
YECKECKKAFRQHSHLTHHLKVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy