ZNF140 (Sorex araneus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSARG00000000083 T109371_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF140
M04621_2.00
Homo sapiens
DRCAATTCCGCTCN

NGAGCGGAATTGYH
SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX
0.774 0.900
ZNF140
M08372_2.00
Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB

VNNNNNNNNNNNDGRGCRGAATTG
ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE
0.774 0.900
ZNF140
M08945_2.00
Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN

NDGGAGYRGAATTGCWRVRNHNNN
Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C
0.774 0.900
ZNF140
M04622_2.00
Homo sapiens
NRCAATTCCGCTCV

BGAGCGGAATTGYN
SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX
0.774 0.900
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000000078 C2H2 ZF 161 183
ENSSARP00000000078 C2H2 ZF 189 211
ENSSARP00000000078 C2H2 ZF 217 239
ENSSARP00000000078 C2H2 ZF 245 267
ENSSARP00000000078 C2H2 ZF 273 295
ENSSARP00000000078 C2H2 ZF 301 323
ENSSARP00000000078 C2H2 ZF 329 351
ENSSARP00000000078 C2H2 ZF 357 379
ENSSARP00000000078 C2H2 ZF 385 407
ENSSARP00000000078 C2H2 ZF 413 435

Links

Other C2H2 ZF family TFs
Other Sorex araneus TFs

Invalid Input OrderBy

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action