CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZKSCAN1
(
Sorex araneus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSARG00000002353
T109409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zkscan1
M00771_2.00
Mus musculus
NNNHDHDNNN
NNNHDHDNNN
PBM
Weirauch et al.(2013)
pTH2280
0.814
0.971
ZKSCAN1
M05847_2.00
Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN
SMiLE-seq
Isakova et al.(2017)
ZKSCAN1
0.814
0.971
ZKSCAN1
M08874_2.00
Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B
0.814
0.971
Zkscan1
M08985_2.00
Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A
0.814
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000002117
C2H2 ZF
228
250
HRCDECGKCFTRSSSLIRHKIIH
ENSSARP00000002117
C2H2 ZF
256
278
YACGECGKAFSLNSNLVLHQRIH
ENSSARP00000002117
C2H2 ZF
284
306
HECHECGKAFSHSSNLILHQRIH
ENSSARP00000002117
C2H2 ZF
312
334
YECGECGKAFSQSSDLTKHQRIH
ENSSARP00000002117
C2H2 ZF
340
362
YECSECGKAFNRNSYLILHRRIH
ENSSARP00000002117
C2H2 ZF
368
390
YKCTKCGKAFTRSSTLTLHHRIH
Links
Other
C2H2 ZF
family TFs
Other
Sorex araneus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy