ZNF18 (Sorex araneus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSARG00000003073 T109417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF18
M08316_2.00
Homo sapiens
NSNRTTCACACY

RGTGTGAAYNSN
ChIP-seq
Schmitges et al.(2016)
P17022.MEME
0.809 0.947
ZNF18
M07602_2.00
Homo sapiens
RGTGTGARBNBNNNN

NNNNVNVYTCACACY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData
0.809 0.947
ZNF18
M08901_2.00
Homo sapiens
NVDVTTCACACY

RGTGTGAABHBN
Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C
0.809 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000002769 C2H2 ZF 280 301
ENSSARP00000002769 C2H2 ZF 307 329
ENSSARP00000002769 C2H2 ZF 335 357
ENSSARP00000002769 C2H2 ZF 363 385
ENSSARP00000002769 C2H2 ZF 391 413

Links

Other C2H2 ZF family TFs
Other Sorex araneus TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZNF18 Dasypus novemcinctus ENSDNOG00000036895 I 0.827
ZNF18 Equus caballus ENSECAG00000025164 I 0.827
ENSMPUG00000003670 Mustela putorius furo ENSMPUG00000003670 I 0.827
ENSAMEG00000013156 Ailuropoda melanoleuca ENSAMEG00000013156 I 0.827
ZNF18 Canis familiaris ENSCAFG00000017843 I 0.827
ZNF18 Choloepus hoffmanni ENSCHOG00000001767 I 0.827
ZNF18 Pteropus vampyrus ENSPVAG00000014085 I 0.825
ZNF18 Erinaceus europaeus ENSEEUG00000011943 I 0.823
ZNF18 Tupaia belangeri ENSTBEG00000007103 I 0.821
ZNF18 Echinops telfairi ENSETEG00000000611 I 0.818
ZNF18 Oryctolagus cuniculus ENSOCUG00000010095 I 0.818
ENSSTOG00000012652 Ictidomys tridecemlineatus ENSSTOG00000012652 I 0.818
ENSTSYG00000006855 Tarsius syrichta ENSTSYG00000006855 I 0.818
ZNF18 Pan troglodytes ENSPTRG00000008782 I 0.816
ENSPPYG00000007992 Pongo abelii ENSPPYG00000007992 I 0.816
ENSNLEG00000014526 Nomascus leucogenys ENSNLEG00000014526 I 0.816
ZNF18 Callithrix jacchus ENSCJAG00000004790 I 0.816
ZNF18 Otolemur garnettii ENSOGAG00000027830 I 0.815
ZNF18 Microcebus murinus ENSMICG00000016196 I 0.812
ZNF18 Homo sapiens ENSG00000154957 D 0.809
ZNF18 Felis catus ENSFCAG00000027934 I 0.809
ENSCSAG00000009126 Chlorocebus sabaeus ENSCSAG00000009126 I 0.805
ENSP00000391376 Macaca fascicularis ENSP00000391376 I 0.805
Zfp18 Rattus norvegicus ENSRNOG00000003981 I 0.805
ENSPANG00000023768 Papio anubis ENSPANG00000023768 I 0.805
Zkscan6 Mus musculus ENSMUSG00000018347 I 0.802
ZNF18 Tursiops truncatus ENSTTRG00000012317 N 0.765
Myotis_brandtii_ZNF18_10012803 Myotis brandtii Myotis_brandtii_ZNF18_10012803 N 0.761
ZNF18 Procavia capensis ENSPCAG00000002958 N 0.757