CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF18
(
Sorex araneus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSARG00000003073
T109417_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF18
M08316_2.00
Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN
ChIP-seq
Schmitges et al.(2016)
P17022.MEME
0.809
0.947
ZNF18
M07602_2.00
Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData
0.809
0.947
ZNF18
M08901_2.00
Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN
Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C
0.809
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000002769
C2H2 ZF
280
301
TCRECGKTFYRNSQLVFHQRTH
ENSSARP00000002769
C2H2 ZF
307
329
FQCPTCKKSFLRSSDFVKHQRIH
ENSSARP00000002769
C2H2 ZF
335
357
CKCDYCGKGFSDFSGLRHHEKIH
ENSSARP00000002769
C2H2 ZF
363
385
YKCPICEKSFIQRSNFNRHQRVH
ENSSARP00000002769
C2H2 ZF
391
413
YKCSRCGKSFSWSSSLDKHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Sorex araneus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy