ZNF250 (Sorex araneus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSARG00000004999 T109455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.804 0.940
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.804 0.940
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.804 0.940
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.804 0.940
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.804 0.940
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000004522 C2H2 ZF 187 209
ENSSARP00000004522 C2H2 ZF 215 237
ENSSARP00000004522 C2H2 ZF 243 265
ENSSARP00000004522 C2H2 ZF 271 293
ENSSARP00000004522 C2H2 ZF 299 321
ENSSARP00000004522 C2H2 ZF 327 349
ENSSARP00000004522 C2H2 ZF 355 377
ENSSARP00000004522 C2H2 ZF 383 405
ENSSARP00000004522 C2H2 ZF 411 433
ENSSARP00000004522 C2H2 ZF 439 461
ENSSARP00000004522 C2H2 ZF 467 489
ENSSARP00000004522 C2H2 ZF 495 517
ENSSARP00000004522 C2H2 ZF 523 545

Links

Other C2H2 ZF family TFs
Other Sorex araneus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.822
ZNF250 Felis catus ENSFCAG00000013730 I 0.815
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.814
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.814
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.814
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.813
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.813
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.805
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.805
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.804
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.804
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.804
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.804
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.804
Zfp647 Mus musculus ENSMUSG00000054967 I 0.804
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.804
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.804
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.804
ZNF250 Homo sapiens ENSG00000196150 D 0.804
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.803
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.803
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.803
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.803
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.802
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.801
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.799
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.799
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.798
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.796
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.787
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.762