CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PLAGL1
(
Sorex araneus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSARG00000007774
T109497_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Plagl1
M00130_2.00
Mus musculus
NNNVCCCCHN
NDGGGGBNNN
PBM
Badis et al.(2009)
Plagl1_0972
0.792
0.877
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000007058
C2H2 ZF
4
26
YPCQLCGKTFLTLEKFTIHSYSH
ENSSARP00000007058
C2H2 ZF
32
56
FKCLQPECGKAFVSRYKLMRHMATH
ENSSARP00000007058
C2H2 ZF
62
84
HQCAHCEKTFNRKDHLKNHLQTH
ENSSARP00000007058
C2H2 ZF
91
113
FGCEECGKKYNTMLGYKRHLALH
ENSSARP00000007058
C2H2 ZF
155
177
HQCDHCERCFYTRKDVRRHMVVH
ENSSARP00000007058
C2H2 ZF
183
206
FLCQFCAQRFGRKDHLTRHTKKTH
Links
Other
C2H2 ZF
family TFs
Other
Sorex araneus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy