CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN23
(
Sorex araneus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSARG00000008482
T109505_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN23
M04613_2.00
Homo sapiens
NYCATGTGCTAATTACAVN
NBTGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_HT-SELEX
0.788
0.904
ZSCAN23
M04614_2.00
Homo sapiens
NYCATGTGCTAATTACRHN
NDYGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_Methyl-HT-SELEX
0.788
0.904
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000007663
C2H2 ZF
176
198
YICGECGKSFTQNSILIEHQRTH
ENSSARP00000007663
C2H2 ZF
204
226
YGCEECGRAFSQRSGLFQHQRLH
ENSSARP00000007663
C2H2 ZF
232
254
YQCRVCGKAFSQNAGLFHHLRVH
ENSSARP00000007663
C2H2 ZF
260
282
YQCGQCHKSFSRRSVLMKHQRIH
ENSSARP00000007663
C2H2 ZF
288
310
FACEECGKNFIYHCNLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Sorex araneus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy