SP3 (Sorex araneus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSARG00000011358 T109555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SP3
M02910_2.00
Homo sapiens
VCCMCRCCCMY

RKGGGYGKGGB
SELEX
Jolma et al.(2013)
SP3_1
0.823 0.986
SP3
M04558_2.00
Homo sapiens
NRCCACGCCCMYH

DRKGGGCGTGGYN
SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX
0.823 0.986
SP3
M08920_2.00
Homo sapiens
NBBNVSCCCCKCCCMBBBNN

NNVVVKGGGMGGGGSBNVVN
Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B
0.823 0.986
SP3
M10263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP3_Q3_01
0.823 0.986
SP3
M10264_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP3_Q3
0.823 0.986
SP3
M04559_2.00
Homo sapiens
NRCCMCGCCCMCH

DGKGGGCGKGGYN
SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX
0.823 0.986
Sp3
M08978_2.00
Mus musculus
NBBNVSCCCCKCCCMBBBNN

NNVVVKGGGMGGGGSBNVVN
Misc
Kulakovskiy et al.(2013)
SP3_MOUSE.H11MO.0.B
0.811 0.986
Spps
M06159_2.00
Drosophila melanogaster
KWDRCCMCGCCCMBH

DVKGGGCGKGGYHWM
B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169
0.791 0.899
Spps
M06160_2.00
Drosophila melanogaster
BDDGCCMCGCCCMYN

NRKGGGCGKGGCHHV
B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169
0.791 0.899
SP4
M02879_2.00
Homo sapiens
NWRGCCACGCCCMCHYN

NRDGKGGGCGTGGCYWN
SELEX
Jolma et al.(2013)
SP4_1
0.782 0.942
SP4
M08296_2.00
Homo sapiens
NNVGCYCCKCCYMYH

DRKRGGMGGRGCBNN
ChIP-seq
Schmitges et al.(2016)
Q02446.MEME
0.782 0.942
SP4
M08873_2.00
Homo sapiens
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A
0.782 0.942
SP4
M10165_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q3
0.782 0.942
SP4
M10166_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q5
0.782 0.942
Sp5
M09016_2.00
Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB

VDRDRRRVDRRGVDRDRGGMGGRG
Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C
0.782 0.899
SP5
M10319_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP5_Q2
0.782 0.899
Sp1
M00765_2.00
Mus musculus
NMCGCCCMY

RKGGGCGKN
PBM
Weirauch et al.(2013)
pTH0978
0.778 0.913
Sp1
M08963_2.00
Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC

GSVSGRGVNGGGGGMGGRGMVGGG
Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A
0.778 0.913
Sp1
M03682_2.00
Drosophila melanogaster
HNGCCACGCCCARK

MYTGGGCGTGGCND
SELEX
Nitta et al.(2015)
Sp1_1
0.778 0.899
Sp1
M06117_2.00
Drosophila melanogaster
DHYMCGCCCMY

RKGGGCGKRDH
B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378
0.778 0.899
Sp1
M06118_2.00
Drosophila melanogaster
NKHHMCGCCCMYNN

NNRKGGGCGKDDMN
B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378
0.778 0.899
SP1
M02921_2.00
Homo sapiens
RCCMCDCCCMH

DKGGGHGKGGY
SELEX
Jolma et al.(2013)
SP1_1
0.775 0.899
SP1
M04605_2.00
Homo sapiens
NWRRCCACGCCCMCH

DGKGGGCGTGGYYWN
SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX
0.775 0.899
SP1
M08096_2.00
Homo sapiens
BYCCCKCCCCY

RGGGGMGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0079.3
0.775 0.899
SP1
M08363_2.00
Homo sapiens
CCCHNBCYCCDCCCY

RGGGHGGRGVNDGGG
ChIP-seq
Schmitges et al.(2016)
P08047.MEME
0.775 0.899
SP1
M08938_2.00
Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN

NRGGGGCGGGGCBDGGVSSSGV
Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A
0.775 0.899
SP1
M10294_2.00
Homo sapiens
DSCMHGCCYH

DRGGCDKGSH
Transfac
Matys et al.(2006)
V$SP1_01
0.775 0.899
SP1
M10295_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_02
0.775 0.899
SP1
M10296_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_07
0.775 0.899
SP1
M10297_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_08
0.775 0.899
SP1
M10298_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_Q2_02
0.775 0.899
SP1
M10299_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP1_Q3
0.775 0.899
SP1
M10300_2.00
Homo sapiens
VVCCCCGCCCMBN

NVKGGGCGGGGBB
Transfac
Matys et al.(2006)
V$SP1_Q6
0.775 0.899
SP1
M04606_2.00
Homo sapiens
NWRGCCMCGCCCMYH

DRKGGGCGKGGCYWN
SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX
0.775 0.899
Sp4
M01862_2.00
Mus musculus
NMCGCCCMY

RKGGGCGKN
PBM
Weirauch et al.(2014)
pTH4998
0.766 0.928
Sp4
M00133_2.00
Mus musculus
HMCGCCCMYN

NRKGGGCGKD
PBM
Badis et al.(2009)
Sp4_1011
0.766 0.928
Sp4
M05859_2.00
Mus musculus
DGNYMCGCCCHNN

NNDGGGCGKRNCH
SMiLE-seq
Isakova et al.(2017)
SP4
0.766 0.928
Sp4
M08975_2.00
Mus musculus
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B
0.766 0.928
SP9
M04645_2.00
Homo sapiens
VMCMCGCCCMYH

DRKGGGCGKGKB
SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX
0.765 0.899
SP9
M04646_2.00
Homo sapiens
RYCACGCCCMYH

DRKGGGCGTGRY
SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX
0.765 0.899
SP8
M02898_2.00
Homo sapiens
VMCACBCCCMCH

DGKGGGVGTGKB
SELEX
Jolma et al.(2013)
SP8_1
0.765 0.884
SP8
M04517_2.00
Homo sapiens
NMCMCGCCCMYH

DRKGGGCGKGKN
SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX
0.765 0.884
SP8
M04518_2.00
Homo sapiens
RHCACGCCCMYH

DRKGGGCGTGDY
SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX
0.765 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000010247 C2H2 ZF 525 549
ENSSARP00000010247 C2H2 ZF 555 579
ENSSARP00000010247 C2H2 ZF 585 607

Links

Other C2H2 ZF family TFs
Other Sorex araneus TFs

557 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.000
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.000
A1O1_08600 Capronia coronata A1O1_08600 I 0.000
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.000
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.000
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.000
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.000
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.000
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.000
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.000
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.000
BN946_scf184858.g55 Trametes cinnabarina BN946_scf184858.g55 I 0.000
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.000
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.000
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.000
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.000
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.000
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.000
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.000
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.000
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.000
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.000
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.000
CC1G_00311 Coprinopsis cinerea CC1G_00311 I 0.000
CERSUDRAFT_149026 Ceriporiopsis subvermispora CERSUDRAFT_149026 I 0.000
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.000
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.000
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.000
E5Q_03025 Mixia osmundae E5Q_03025 I 0.000
E5Q_03026 Mixia osmundae E5Q_03026 I 0.000
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.000
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.000
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.000
EVEC_0001085201 Enterobius vermicularis EVEC_0001085201 I 0.000
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.000
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.000
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.000
FIBRA_04592 Fibroporia radiculosa FIBRA_04592 I 0.000
FOMPIDRAFT_1038544 Fomitopsis pinicola FOMPIDRAFT_1038544 I 0.000
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.000
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.000
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.000
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.000
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.000
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.000
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.000
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.000
HelroG82191 Helobdella robusta HelroG82191 I 0.000
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.000
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.000
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.000
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.000
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.000
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.000
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.000
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.000
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.000
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.000
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.000
ML02801a Mnemiopsis leidyi ML02801a I 0.000
Moror_7356 Moniliophthora roreri Moror_7356 N 0.000
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.000
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.000
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.000
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.000
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.000
NERG_01713 Nematocida sp NERG_01713 I 0.000
O9G_004738 Rozella allomycis O9G_004738 I 0.000
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.000
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.000
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.000
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.000
PDE_02161 Penicillium oxalicum PDE_02161 I 0.000
PGTG_11391 Puccinia graminis PGTG_11391 I 0.000
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.000
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.000
PHSY_002871 Pseudozyma hubeiensis PHSY_002871 N 0.000
PIIN_08876 Piriformospora indica PIIN_08876 N 0.000
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.000
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.000
PLEOSDRAFT_1038101 Pleurotus ostreatus PLEOSDRAFT_1038101 I 0.000
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.000
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.000
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.000
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.000
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.000
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.000
PTTG_01668 Puccinia triticina PTTG_01668 I 0.000
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.000
PV06_00023 Exophiala oligosperma PV06_00023 I 0.000
PV08_04071 Exophiala spinifera PV08_04071 I 0.000
PV10_05596 Exophiala mesophila PV10_05596 I 0.000
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.000
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.000
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.000
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.000
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.000
SCLCIDRAFT_138144 Scleroderma citrinum SCLCIDRAFT_138144 I 0.000
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.000
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.000
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.000
SMUV_0001085601 Syphacia muris SMUV_0001085601 I 0.000
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.000
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.000
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.000
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.000
sr13205 Sporisorium reilianum sr13205 N 0.000
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.000
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.000
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.000
UHOR_03310 Ustilago hordei UHOR_03310 N 0.000
V565_046180 Rhizoctonia solani V565_046180 N 0.000
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.000
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.000
RFX1 Saccharomyces cerevisiae YLR176C D 0.000
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.000
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.000
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.000
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.000