CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF12
(
Sorex araneus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSARG00000012430
T109580_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.820
0.962
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.820
0.962
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.820
0.962
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000011224
C2H2 ZF
262
284
YECTACGKSFCKKSKFIIHQRTH
ENSSARP00000011224
C2H2 ZF
290
312
YECTQCGKSFCQKGTLTVHQRTH
ENSSARP00000011224
C2H2 ZF
318
340
YECSECGKTFYQKLHLIQHQRTH
ENSSARP00000011224
C2H2 ZF
346
368
YECSYCGKSFCQKTHLTQHQRTH
ENSSARP00000011224
C2H2 ZF
374
396
YVCHDCGKTFSQKSALNDHQKIH
ENSSARP00000011224
C2H2 ZF
402
424
YKCNECGKCFCRKSTLTTHQRTH
ENSSARP00000011224
C2H2 ZF
430
452
YECNECGKFFSRLSYLTVHYRTH
ENSSARP00000011224
C2H2 ZF
458
480
YECTDCGKTFYLNSALMRHQRVH
ENSSARP00000011224
C2H2 ZF
486
508
YECSECGKLFSQLSYLTIHHRTH
ENSSARP00000011224
C2H2 ZF
514
536
YECNECGKTFYQNSALCRHRRIH
ENSSARP00000011224
C2H2 ZF
542
564
YECYICGKFFSQMSYLTIHHRIH
ENSSARP00000011224
C2H2 ZF
570
592
YECSECGKTFCQNSALNRHQRTH
ENSSARP00000011224
C2H2 ZF
598
620
YECYECGKFFSQMSYLTIHHRIH
ENSSARP00000011224
C2H2 ZF
626
648
FECNKCGKAFSRMSYLTVHYRTH
ENSSARP00000011224
C2H2 ZF
654
676
YECTECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Sorex araneus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy